Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00700 ATGAACGAGAAGGCTAATGTTTCTAAAGAGCTCAACGCCAGGCACAAAAAGATACTGGAAGGACTTCTTAAATTACCAGAGAATAGGGAATGTGCCGACTGCAAAGCTAAGGGTCCAAGATGGGCTAGTGTGAACCTAGGCATCTTTATATGTATGCAGTGTTCAGGAATACACCGAAGTCTTGGGGTTCATATATCAAAGGTGCGGTCTGCAACATTGGACACTTGGCTTCCAGAGCAGGTTGCATTCATTCAATCAATGGGAAATGAGAAAGCAAACAGCTATTGGGAATCAGAGTTACCACCAAATTATGACAGAGTTGGAATTGAGAATTTCATTCGTGCAAAGTATGAGGAGAAGAGATGGGTTCCAAGGGATGGAAAACCAAAATCACCTTCTAGACTGCAGGATGAGAAGGCTTCTTCACAATGGCAAAGACCAACAGCACGAAGTGGGCATGGGTATGCATCTGTTTCTGAGAGTACATTTGAGGAAAGAAAGAAAGTTCAACCATCAAATACAGTTCCTGCTACAAGAATTAGTGTTCCTGCTCCTCCCAAAGGACCTCCTGACCAGGTGACTCCTACAAAACCACAACATGTTGAGAAAGTTGAACCAGTGGCACCACAACCACAAGCAGAAACAACAAAACAACCCACCGAAACAGCTCAAGATGTCCCTCCAAAAGTTGATTATGCTACAGACCTTTTCAACATGTTGTCTATGGATGGCCCAAGTGAAAATGGCTCAGAGACAGCTAGTGCTGATGACAATAACTGGGCAGGTTTCCAGTCTGCCACAGAGCCATCAACAGCTGAGAAAACTGTTTCAACAAAAGCAGTTGAAAGTACTCCCCAGCCTGCTTCTGGGATTGAGGATTTATTTAAAGATTCACCTTCAGTGACTCCAAGCTTAGTTCCAGAAAAACCGCAAAAAGATGTAAAAAATGATATCATGAGCCTCTTTGAGAAGTCAAGTATGGTGTCTCCATTTGCTATGCATCAGCAACAGCTTGCCATGTTGGCACAACAACAGTCACTTCTAATGGCAGCCGCAGCTAAATCTGCTGGTGGGGACCCCAAATTTCCTGTTAGTTCACAACAGCCTGGACTGAATGGATCTATTCCTGTCCAAAGTTGGCCAACAGCTGGCTTCCCTATTCCTGGAGCAATGCCCGTGGGTGGTCAGGGAGATCCGCAGAAACTCATCCAGGCTTGGAACACGGCACCAGCAAATCAAATGGGGAGCTCTGTTCAGTATCCATCATCTGGTTTCTATACGACGGGACAAGTTGCTCCAGTTAATGGTATGATGACAGCTGGAGTGAGTAAACCTCAGTCAGCAGCTCCAGTGTCATCAACTTCTTCACAGACAGGATCGGGGAAGGATTATGATTTTTCCTCTTTAACACAAGGGATGTTTGCGAAACCCTGATTGGCCTTTATCATTTGACAAGCGGCTATGTCATATACCTTAGAAGATTAGTTCAAATTACAGGAGGCGCACCTGCGTTTGCTTTCTTTCCCCTCGACCTTTCTTGGGTTGTAAACCTTTTGTAGAGCTATTTCAGTTTTTTCTTTACTTGTTTTGTGTGATTACTTCATTTGTATGATTAGGTTCATTAACAATAATAAAGCTAGTGAGAGACGAATCATTTTTCCTGTCTTTGC 1670 0.4383 MNEKANVSKELNARHKKILEGLLKLPENRECADCKAKGPRWASVNLGIFICMQCSGIHRSLGVHISKVRSATLDTWLPEQVAFIQSMGNEKANSYWESELPPNYDRVGIENFIRAKYEEKRWVPRDGKPKSPSRLQDEKASSQWQRPTARSGHGYASVSESTFEERKKVQPSNTVPATRISVPAPPKGPPDQVTPTKPQHVEKVEPVAPQPQAETTKQPTETAQDVPPKVDYATDLFNMLSMDGPSENGSETASADDNNWAGFQSATEPSTAEKTVSTKAVESTPQPASGIEDLFKDSPSVTPSLVPEKPQKDVKNDIMSLFEKSSMVSPFAMHQQQLAMLAQQQSLLMAAAAKSAGGDPKFPVSSQQPGLNGSIPVQSWPTAGFPIPGAMPVGGQGDPQKLIQAWNTAPANQMGSSVQYPSSGFYTTGQVAPVNGMMTAGVSKPQSAAPVSSTSSQTGSGKDYDFSSLTQGMFAKP 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00700 477 CDD ArfGap 19 117 - -
Bach9g00700 477 PRINTS HIV Rev interacting protein signature 28 47 IPR001164 GO:0005096
Bach9g00700 477 PRINTS HIV Rev interacting protein signature 68 89 IPR001164 GO:0005096
Bach9g00700 477 PRINTS HIV Rev interacting protein signature 47 64 IPR001164 GO:0005096
Bach9g00700 477 MobiDBLite consensus disorder prediction 123 226 - -
Bach9g00700 477 Pfam Putative GTPase activating protein for Arf 17 123 IPR001164 GO:0005096
Bach9g00700 477 MobiDBLite consensus disorder prediction 440 467 - -
Bach9g00700 477 SMART arf_gap_3 16 130 IPR001164 GO:0005096
Bach9g00700 477 MobiDBLite consensus disorder prediction 243 285 - -
Bach9g00700 477 MobiDBLite consensus disorder prediction 243 310 - -
Bach9g00700 477 FunFam stromal membrane-associated protein 1 isoform X1 1 128 - -
Bach9g00700 477 MobiDBLite consensus disorder prediction 136 158 - -
Bach9g00700 477 MobiDBLite consensus disorder prediction 440 477 - -
Bach9g00700 477 Gene3D Arf GTPase activating protein 1 130 IPR038508 -
Bach9g00700 477 ProSiteProfiles ARF GTPase-activating proteins domain profile. 16 130 IPR001164 GO:0005096
Bach9g00700 477 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 476 IPR044520 GO:0005096
Bach9g00700 477 SUPERFAMILY ArfGap/RecO-like zinc finger 15 124 IPR037278 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00700 Bach-Chr9 4947766 4952611 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00700 16 123 C2H2 Transcription Factor Family AT4G05330 48.276 1.06e-29 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00700 K12486 - gmx:100807561 697.967