Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00685 ATTGGCTTAGGGCAAAGTCCTATTCCTTTCAAAACCCTTCTTCAATTCCTCTTTGAGAATTTTCTGAAAAGAAAGGGTTTTTGCTCAGAAATGATAGACCCCATGGACTTGCTTCGATCGAACCTTTCCCGGGTTCGGATCCCAGAACCCACCAATCGTATCTACAAGCAAGAATGCTGCTTGTCTTTCGAAACTCCGAGGTCAGAAGGTGGACTGTTTATTGACATGTGCACCTTTCTTGCTTTTGGCAAGGATTATGTGGGTTGGAATTATGAGAAGACTGGAAATCCTGTTTATCTTCATATAAAGCAGACAAAGAAATTAGTTCCAGAAGACAGGCCTTCAAAGAAACCAACTCTATTGGCTATAGGTGTTGATGGGGGATTTGATAACAATGAACCTGAATATGAAGAAACTCACAGTATAATTATATTGCCTGACTATGTATCACTTCCATTTCCTTCAGTGGAATTGCCTGAGAAGGTAAGGTTGGCTGCTGATGCTATCATACATACTGAGGGTGCTGAAAGGAAAGAACAACTTGCAGCTTGGACTGTTGATAAGAAACAAACCAGTGCCTATGCGGTGAATCTACAGCAGATTGGCAATGGTGTTAGCATTCCTCCATCGGGATGGAAATGTGCTAAGTGTGAGAAGACTAACAATCTTTGGCTAAATCTGACAGATGGAATGATCCTTTGTGGGAGGAAAAACTGGGATGGAACTGGTGGCAACAACCATGCAGTTGAACACTATAAGGAGACAGGTTATCCTCTTGCTGTAAAGCTTGGGACTATCACTGCTGATTTGGAAGCAGCAGGTAATGCCCTCTTGCGCTCAGATGTTTACTCCTATCCCGAGGATGACAGTGTTTTTGATCCACTTTTAGCACAGCATTTGGCATTTTTTGGCATTGACTTTTCGTCACTTCGAAAGACTGAAATGACAACTGCTGAAAGAGAACTGGACCAAAATACCAATTTTGATTGGAACCGAATCCAAGAAAGTGGACAGGAAGTGGAACCTATTTTTGGACCTGGATATACAGGATTGGTCAATCTTGGAAACAGCTGTTACTTGGCAGCTACTATGCAAGTTGTGTTTTCTACAAGGTCCTTCACTTCACGGTATTGCTTGAACCAAAGTCTAAAGAAGGCATTTGAGGTAGCTCCTGTTGATCCAACTGTAGACCTGAATATGCAGTTGACAAAATTGGCTCATGGTTTACTATCTGGTAAATATTCTGTTCCTACATTGGAGAATAATGAAAATGCTAATTTGGCTACTCCAACTACCACTGCTAAGCAGGAAGGGATTCCCCCACGCATGTTCAAAGCTGTAATTGCCGCTAGCCACCCGGAATTTACATCCATGAGGCAACAGGATGCTTTGGAATTTTTCCTACATTTTCTTGACCAAGTGGAACGGGCCAATGCTGTAAATCCTGTACTTGATCCTGCAAGGAGTTTCAAGTTTGGTATTGAAGATCGAATCCTGTGTTCATCTGGAAAAGTTGCATATAATAGAAGGAATGACTACATCCTTTCTCTTAATATTCCTCTGTATGAAGCAACTAATAAAGGAGAATTAGAAGCCTTTAACAAAATGAAAGCAGAGAAACTTGCTGAAGGAAAGGAAGTGTCTGGCGATGAGATTGTTCGTCCAAGGGTGCCCTTGGAAGCTTGCCTTGCGAACTTCTCAGCTCCTGAGGAGATACATGATTTTTACAGCACTGCCTTAAATGCAAAGACAACAGCTGTGAAGACAGCAGGTCTAACCTCATTCCCTGATTACCTGGTGTTACACATGCGAAAATTTGTTATGGAAGCAGGCTGGGTACCCAAAAAGCTTGATGTCTATATAGATGTTCCTGATATCATAGATATTAGTCATATGCGGAGCAAAGGTCACCAAGTTGGGGAAGAGCTGTTACCAGATGGAGTTCCTGATAAGGAGGAATCAAGCATACCTTCAGCCAATGAAGATATTGTTGCGCAGCTGGTCTCCATGGGCTTTAACCATCTTCACTGTCAGAAAGCTGCTATATACACCTCAAATGCCGGAGTAGAAGAGGCAATGAATTGGTTACTATCTCACATGGATGATCCAGATATCAACAATCCTATTTCCGAAGGGCATAAATCTGAAACTTGGTCAAGCATTGACCAATCAAAAGTTGATACTTTAATTTCATTCGGATTTCAAGAGGAAATTGCTCGGAAGGCACTGAAGGCATCGGGCGGTGACATTGAGAAAGCGACCGATTGGATATTTAGCAATCCTGATGCATCCGTTTCCAGCATGGATGCTACTACCTCTGGGACTCAACCGGTTCCCAATGATGCCGACCTACCAGATGGAGGAGGAAGATATCGACTTATTGGAATTGTTAGTCACATTGGAACCTCTACCCAGTGTGGTCACTATGTTGCCCACATTGTCAAAGACGGTAGATGGGTTATCTTCAACGACAACAAGGTTGCGGCTTCCATTAATCCTCCCAAGGACATGGGCTATCTCTATTTCTTCGGGAGGCTTGGTAATTGAATACTAATTAAATAGGATGGATGGATGGATACCTGAGAGTTTCAGAATTGCACGAGGATACATGGGCTATCTCTATTACAAAATGGTATTCTTATCGGCTTCACTCTTTTCTGGTTTCACCAGAAGTGCGGCATTCATGGAAACATAAATAACTTTAACTCTCAGGTCCAATGTTAAGTTATAACTTTTTGATGAATATTTAAATTTATCACTATTATACTATATTGAGTATAACATAGTACTTCCACTATACTGTGTTCATGGAAACCAGGGTAATAAGTTTGAAA 2834 0.4167 MDLLRSNLSRVRIPEPTNRIYKQECCLSFETPRSEGGLFIDMCTFLAFGKDYVGWNYEKTGNPVYLHIKQTKKLVPEDRPSKKPTLLAIGVDGGFDNNEPEYEETHSIIILPDYVSLPFPSVELPEKVRLAADAIIHTEGAERKEQLAAWTVDKKQTSAYAVNLQQIGNGVSIPPSGWKCAKCEKTNNLWLNLTDGMILCGRKNWDGTGGNNHAVEHYKETGYPLAVKLGTITADLEAAGNALLRSDVYSYPEDDSVFDPLLAQHLAFFGIDFSSLRKTEMTTAERELDQNTNFDWNRIQESGQEVEPIFGPGYTGLVNLGNSCYLAATMQVVFSTRSFTSRYCLNQSLKKAFEVAPVDPTVDLNMQLTKLAHGLLSGKYSVPTLENNENANLATPTTTAKQEGIPPRMFKAVIAASHPEFTSMRQQDALEFFLHFLDQVERANAVNPVLDPARSFKFGIEDRILCSSGKVAYNRRNDYILSLNIPLYEATNKGELEAFNKMKAEKLAEGKEVSGDEIVRPRVPLEACLANFSAPEEIHDFYSTALNAKTTAVKTAGLTSFPDYLVLHMRKFVMEAGWVPKKLDVYIDVPDIIDISHMRSKGHQVGEELLPDGVPDKEESSIPSANEDIVAQLVSMGFNHLHCQKAAIYTSNAGVEEAMNWLLSHMDDPDINNPISEGHKSETWSSIDQSKVDTLISFGFQEEIARKALKASGGDIEKATDWIFSNPDASVSSMDATTSGTQPVPNDADLPDGGGRYRLIGIVSHIGTSTQCGHYVAHIVKDGRWVIFNDNKVAASINPPKDMGYLYFFGRLGN 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00685 814 Pfam Zn-finger in ubiquitin-hydrolases and other protein 180 260 IPR001607 GO:0008270
Bach9g00685 814 ProSitePatterns Ubiquitin specific protease (USP) domain signature 2. 757 775 IPR018200 GO:0004843|GO:0006511
Bach9g00685 814 PANTHER UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 133 809 - -
Bach9g00685 814 SMART Zf_UBP_1 179 234 IPR001607 GO:0008270
Bach9g00685 814 CDD Peptidase_C19B 316 809 - -
Bach9g00685 814 FunFam Ubiquitin carboxyl-terminal hydrolase 144 260 - -
Bach9g00685 814 SUPERFAMILY UBA-like 682 728 IPR009060 GO:0005515
Bach9g00685 814 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 315 812 IPR028889 -
Bach9g00685 814 ProSitePatterns Ubiquitin specific protease (USP) domain signature 1. 316 331 IPR018200 GO:0004843|GO:0006511
Bach9g00685 814 Gene3D Cysteine proteinases 308 812 - -
Bach9g00685 814 Pfam Ubiquitin carboxyl-terminal hydrolase 315 809 IPR001394 GO:0004843|GO:0016579
Bach9g00685 814 SMART uba_6 688 725 IPR015940 -
Bach9g00685 814 SMART uba_6 626 664 IPR015940 -
Bach9g00685 814 CDD UBA2_atUBP14 690 727 - -
Bach9g00685 814 PIRSF UBP 3 813 IPR016652 GO:0004843|GO:0016579
Bach9g00685 814 SUPERFAMILY Cysteine proteinases 311 811 IPR038765 -
Bach9g00685 814 Pfam UBA/TS-N domain 626 662 IPR015940 -
Bach9g00685 814 Pfam UBA/TS-N domain 687 723 IPR015940 -
Bach9g00685 814 FunFam Ubiquitin carboxyl-terminal hydrolase 666 731 - -
Bach9g00685 814 FunFam Ubiquitin carboxyl-terminal hydrolase 308 641 - -
Bach9g00685 814 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 260 IPR013083 -
Bach9g00685 814 ProSiteProfiles Zinc finger UBP-type profile. 156 273 IPR001607 GO:0008270
Bach9g00685 814 MobiDBLite consensus disorder prediction 731 750 - -
Bach9g00685 814 Gene3D - 612 678 - -
Bach9g00685 814 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 624 665 IPR015940 -
Bach9g00685 814 MobiDBLite consensus disorder prediction 731 745 - -
Bach9g00685 814 FunFam Ubiquitin carboxyl-terminal hydrolase 1 98 - -
Bach9g00685 814 SUPERFAMILY RING/U-box 158 273 - -
Bach9g00685 814 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 104 IPR013083 -
Bach9g00685 814 FunFam Ubiquitin carboxyl-terminal hydrolase 623 665 - -
Bach9g00685 814 Gene3D - 679 732 - -
Bach9g00685 814 CDD UBA1_atUBP14 626 670 - -
Bach9g00685 814 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 686 726 IPR015940 -
Bach9g00685 814 Pfam Variant UBP zinc finger 11 73 IPR041432 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00685 Bach-Chr9 4769535 4776955 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00685 618 672 C2H2 Transcription Factor Family AT1G04850 36.364 3.88e-07 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00685 K11836 - gmx:100805602 1396.72