Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00572 ATGCGTAACCTCTTGCAAGTAGATCGCGGTGATGATGGTCCTCCAATCCGCTTTTTCGATAATAGGAGATCCCACCAAAGCGACTTTAACAGAAAGATCTTACTCACAGCTATCATCTCTTTATCATGTGTTTTACTTCTAGTTATTGCGCTTCACCTCTACGCTCGATGCGTTCTAAGGCGCCAGGCTCGTCGCCGCGCTTCTATTGTCCAGTTCAGGCTCACCGTGGCTCGTGCTCCAGATCATGCCCACTCCACAGACCCACCCAACACTGGGCTCGACCCAATGGTCATAGCAGCTCTCCCCGTCTTCCTCTTCAGACGCAAGGAACAAACTCAACAGAATCACTACGATTCTTCTGTGGTGGAGTGTGCTGTGTGTTTGAGTGCTCTGGAAGATCAAGAAAGGGTGAGGTTGCTTCCAAATTGCAACCACACTTTCCATGTGGCCTGTATTGACGCATGGTTGGCTTCACATTCTACGTGTCCCATTTGTCGAACCAAGGCTGAGCCACGGCTCGAACCATACCCACGTGAGTCTCCTGCTGCTGCTCATGCTGATGCACCAACGGCTCCACCATCGGAACAACAGCCTATAGAGGGTACATCAGATGGTGGATCACCAAAAATCAATGGTTCCAACTCACGCATGAGCTCATTCAGAAGAATTCTTAGTAGGGAAAGATCGTCAAGAAGAATCCAACCTGCTAGAGAAGATGATCATACTACCATTCAAGATTTGGAGAGACCGTGA 753 0.4914 MRNLLQVDRGDDGPPIRFFDNRRSHQSDFNRKILLTAIISLSCVLLLVIALHLYARCVLRRQARRRASIVQFRLTVARAPDHAHSTDPPNTGLDPMVIAALPVFLFRRKEQTQQNHYDSSVVECAVCLSALEDQERVRLLPNCNHTFHVACIDAWLASHSTCPICRTKAEPRLEPYPRESPAAAHADAPTAPPSEQQPIEGTSDGGSPKINGSNSRMSSFRRILSRERSSRRIQPAREDDHTTIQDLERP 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00572 250 SMART ring_2 124 165 IPR001841 -
Bach9g00572 250 MobiDBLite consensus disorder prediction 175 250 - -
Bach9g00572 250 MobiDBLite consensus disorder prediction 221 250 - -
Bach9g00572 250 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 80 172 IPR013083 -
Bach9g00572 250 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 24 180 - -
Bach9g00572 250 FunFam E3 ubiquitin-protein ligase ATL6 81 172 - -
Bach9g00572 250 CDD RING-H2_EL5-like 123 166 - -
Bach9g00572 250 MobiDBLite consensus disorder prediction 195 220 - -
Bach9g00572 250 Pfam Ring finger domain 123 166 IPR001841 -
Bach9g00572 250 SUPERFAMILY RING/U-box 123 175 - -
Bach9g00572 250 ProSiteProfiles Zinc finger RING-type profile. 124 166 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00572 Bach-Chr9 4010922 4011674 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00572 28 249 C3H Transcription Factor Family AT2G42360 44.493 3.99e-49 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00572 K19038 - qsa:O6P43_000799 226.868