Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00563 GATCTCCCTCTCCTCTGCTTCCGCAGCAGGATTCACTGACTGCATCACCACCTCACCTTCTGCATCTTTTATTTGAGAAAGCTTCCAAATCCAACATGACAAACAAGAAAATGCTGCCATTTCATCATTAAATTTGTTTATGTGAAACAGGGTTCGCCTTGTTTTCTTCATGGAAATTATAGATAGCAAAAGCAGCACAACAACAGGCTTTCCTTGGCTGTCTTTTGGTTTTTGTCCCCTAAAGTCTTTTTCTTGCTCTGGCTTCTTTCTTCACTCACTGTTCACTCTTTGTGAAATTGCTTGCTTACCCTCTTGAGCCTGTAATTTAGATAAGCCATGGAAGCTTTTAATTGGAGCTCGGGCAGCATTCATGGTAATGCTCCAGAGAAAGATTTTAACGGTTTTCTAGTTAACCCTACCGTAGTGGGAAGTGGGTTTCCTTCATCTTCATCTCTGGTTTTGGATGGCGAGAGAGGAGAACTTGTGGAGGCTCCTGCCAAATTGGAACACAAGGGTGTCTCCACTGAGAGAAGTATTGTGGCTTTGAAAAATCATAGCGAGGCAGAGCGGAGAAGAAGAGCAAGGATTAATTCTCATCTTGATACGCTTCGCAGTGTGATTCCAGGAGCTAAGAAGATGGACAAAGCATCATTACTGGCAGAGGTTATCAGACATTTAAAAGACCTGAAAAGGAATGCAGAGCAAGTTTGTGAAGGTTTGATGATGCCAAAAGACAACGATGAAATAAGAGTTGAAGAACAGGAGGTTGGGTCAGATGGATTCCCTTATTCAATTAGGGCGTCACTATGTTGTGAACATAAACCTGGGTTATTGTCTGATATTAGACAAGCTCTTGATGCCCTTCATCTTATGATAGTTAGAGCAGAAATTGCAACCTTGGGAGGCTGGATGAAAAATGTCTTTGTGCTAATTAGCTGCAAACAACAGAACACAGAAGATGCTGAATATCGTCAACTTCTTACTGGTTCTGTTCATCGAGCTCTCAGGTCTGTACTAGATAGATTTTCTGCTTCACAGGATCTCCTAGGAACCCGAAAGAGACGTAGAATTTCAATATTCAGTTCATCATCTTTAGAAGATTTCTTGTGA 1110 0.4162 MEAFNWSSGSIHGNAPEKDFNGFLVNPTVVGSGFPSSSSLVLDGERGELVEAPAKLEHKGVSTERSIVALKNHSEAERRRRARINSHLDTLRSVIPGAKKMDKASLLAEVIRHLKDLKRNAEQVCEGLMMPKDNDEIRVEEQEVGSDGFPYSIRASLCCEHKPGLLSDIRQALDALHLMIVRAEIATLGGWMKNVFVLISCKQQNTEDAEYRQLLTGSVHRALRSVLDRFSASQDLLGTRKRRRISIFSSSSLEDFL 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00563 257 SMART finulus 74 123 IPR011598 GO:0046983
Bach9g00563 257 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 123 IPR036638 GO:0046983
Bach9g00563 257 SUPERFAMILY ACT-like 156 204 IPR045865 -
Bach9g00563 257 Gene3D - 68 125 IPR036638 GO:0046983
Bach9g00563 257 CDD ACT_UUR-ACR-like 156 198 - -
Bach9g00563 257 PANTHER TRANSCRIPTION FACTOR BHLH30 36 249 IPR045847 GO:0003700|GO:0006355
Bach9g00563 257 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 68 117 IPR011598 GO:0046983
Bach9g00563 257 Pfam Helix-loop-helix DNA-binding domain 72 117 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00563 Bach-Chr9 3943906 3945625 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00563 54 246 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G68810 41.919 2.95e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach9g00563 HLH 2.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00563 - - gmx:100783322 352.058