Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00560 ATGGTGGTTCCTGTTCTTCGTTATCTCTGGTCCTCAACCAGAAAATCATTTTCTTCTTCTTCATCCCCTCTCACTCCATATCGCTTATTCCCACGAACCAGTCCCTTCTCACGTGACTTCTCAGCCGGTCCGGCGGCCGCAGCCTCCTCCGCCTTCGAATCTAATAGTGCCCTCGACCCTAGCCGCCTCCGCAACGTGGCTGTGATAGCCCATGTTGACCATGGCAAGACTACCCTCATGGATCGATTACTTCGTCAATGTGGCGCCGACATACCCCACGAGCGCGCCATGGATTCCATCAGTCTTGAGCGAGAGCGCGGTATCACAATCGCTTCCAAGGTTACATCCATTTCATGGAAGGAAAATGAGCTAAACATGGTTGATACACCGGGACATGCTGATTTTGGTGGTGAAGTTGAACGGGTGGTTGGTATGGTTGAAGGAGCAATTCTGGTTGTAGATGCTGGTGAAGGTCCGCTGGCACAAACCAAATTTGTTCTTGCAAAAGCCTTAAAATATGGGTTGCGACCTCTTCTTCTTTTGAACAAAGTAGACCGGCCTTCAGTTTCTGAGGAGAGATGTAATGAAGTTGAGAGTCTGGTGTTTGATCTTTTTGCAAACCTGGGTGCTACAGAGGAGCAACTAGACTTTCCAGTTCTTTATGCTTCTGCCAAAGAAGGATGGGCGTCCACCACCTTTACCAAGGATCCTCCTGCTGAGGGGAAAAATATGTCACAATTGCTTGATGCCATTATATCACATGTTCTACCACCAAAAGCAAACATTGATGCACCTTTTCAAATGCTGGTTTCGATGATGGAACGTGATTTCTATCTTGGACGAATCTTGACTGGACGCATTCATTCTGGGGTTGTTCGTGTTGGTGATAGAGTTCATGGACTTCGTAACAAAGATTCTGGTGTCGAAAAGATTGAAGATGGAAAGGTGATGAAACTGATGAAGAAAAAGGGTACAAGCATGGTTCTAACTGATTGTGCTGGAGCTGGTGATATTATTTCAATGGCTGGCTTAGCAAGTCCCGCAATAGGCCATACGGTAGCAACTGATGAGGTTATGTCTACATTGCCGACAATTGAGTTGGACCCTCCAACAATCTCCATGACTTTTGGTGTAAATGACTCTCCATTAGCTGGTCGTGATGGTACTCATTTGACTGGTGGAAGAATTGGTGACCGGCTGATGGCTGAAGCTGAAACAAACCTTGCCATAAATGTGCTTCCTGGCTTATCAGAGTCATTTGAAGTTCAGGGACGAGGAGAGCTACAACTGGGTATCTTAATTGAGAATATGAGGCGTGAAGGATTTGAGTTGTCTGTCTCTCCTCCTAAAGTCATGTATAAAACTGAAGATGGTCAGAAACTTGAGCCAATAGAAGAAGTTACTATTGAGGTAAACGATGAGCATGTGGGGTTAGTAATGGAGGCCTTGTCTCATAGGCGAGCTGAGGTTAATGACATGGGTCCTGTCTCAGGAGCTGTTGGTCGGACTAGATTGTCTTTAACATGTCCATCAAGGGGCTTGGTTGGTTACAGAAGTGTGTTTAGCAGTGACACACGTGGAACTGGCTTTATGCATCGTGCTTTCCTAAAGTATGAAAAACATCGAGGTCCTCTTGGCAATGTCAGGAAAGGAGTACTGGTTTCAATGGGTTTTGGGACAATCACAGCGCATGCATTAACAAGCTTGGAACCTCGTGGGACTCTGTTTGTGCCCCCTGGAGTTGAGACATATGATGGAATGATTGTTGGGGAACATTCACGGGATACGGATCTTGATGTCAATCCAGTGAGAACTAAAGAACTTACAAATATTCGTGCTCCAGGCAAGGATGAGAATGTGAAGCTATCTCCCCCTCGCCTAATGACGCTTGAAGCAGCTATTGGGTATGTTGCTTCAGATGAGCTTATTGAGGTTACTCCGAAGGCCATCCGGTTAAGGAAAAAATATCTCGATGTTAACAAGCGTAAAAGCATGAGTAAAAAGGCAAAGGAATGAGGAGTTTGTCCTCCATGCAGTTTTGTAGCACTAATTTATTGAGTGAAAGGAATGAGGAGTCTGTCCTCCATGCAGTTTTGTAACACTAATTTA 2109 0.4547 MVVPVLRYLWSSTRKSFSSSSSPLTPYRLFPRTSPFSRDFSAGPAAAASSAFESNSALDPSRLRNVAVIAHVDHGKTTLMDRLLRQCGADIPHERAMDSISLERERGITIASKVTSISWKENELNMVDTPGHADFGGEVERVVGMVEGAILVVDAGEGPLAQTKFVLAKALKYGLRPLLLLNKVDRPSVSEERCNEVESLVFDLFANLGATEEQLDFPVLYASAKEGWASTTFTKDPPAEGKNMSQLLDAIISHVLPPKANIDAPFQMLVSMMERDFYLGRILTGRIHSGVVRVGDRVHGLRNKDSGVEKIEDGKVMKLMKKKGTSMVLTDCAGAGDIISMAGLASPAIGHTVATDEVMSTLPTIELDPPTISMTFGVNDSPLAGRDGTHLTGGRIGDRLMAEAETNLAINVLPGLSESFEVQGRGELQLGILIENMRREGFELSVSPPKVMYKTEDGQKLEPIEEVTIEVNDEHVGLVMEALSHRRAEVNDMGPVSGAVGRTRLSLTCPSRGLVGYRSVFSSDTRGTGFMHRAFLKYEKHRGPLGNVRKGVLVSMGFGTITAHALTSLEPRGTLFVPPGVETYDGMIVGEHSRDTDLDVNPVRTKELTNIRAPGKDENVKLSPPRLMTLEAAIGYVASDELIEVTPKAIRLRKKYLDVNKRKSMSKKAKE 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00560 671 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 61 259 IPR000795 GO:0003924|GO:0005525
Bach9g00560 671 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 60 233 - -
Bach9g00560 671 SUPERFAMILY EF-G C-terminal domain-like 462 577 IPR035647 -
Bach9g00560 671 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 98 113 IPR031157 -
Bach9g00560 671 FunFam GTP-binding protein TypA 371 479 - -
Bach9g00560 671 Gene3D bipa protein 548 663 IPR042116 -
Bach9g00560 671 CDD BipA_III 370 447 IPR047043 -
Bach9g00560 671 PRINTS GTP-binding elongation factor signature 141 152 IPR000795 GO:0003924|GO:0005525
Bach9g00560 671 PRINTS GTP-binding elongation factor signature 125 135 IPR000795 GO:0003924|GO:0005525
Bach9g00560 671 PRINTS GTP-binding elongation factor signature 65 78 IPR000795 GO:0003924|GO:0005525
Bach9g00560 671 PRINTS GTP-binding elongation factor signature 177 186 IPR000795 GO:0003924|GO:0005525
Bach9g00560 671 PRINTS GTP-binding elongation factor signature 105 113 IPR000795 GO:0003924|GO:0005525
Bach9g00560 671 NCBIfam small GTP-binding protein domain 64 203 IPR005225 GO:0005525
Bach9g00560 671 Gene3D Elongation Factor G (Translational Gtpase), domain 3 371 655 - -
Bach9g00560 671 Gene3D Translation factors 260 364 - -
Bach9g00560 671 Gene3D - 453 547 - -
Bach9g00560 671 FunFam GTP-binding protein TypA 548 634 - -
Bach9g00560 671 FunFam Elongation factor family protein 260 364 - -
Bach9g00560 671 FunFam GTP-binding protein TypA 62 259 - -
Bach9g00560 671 Pfam Elongation factor Tu domain 2 280 353 IPR004161 GO:0005525
Bach9g00560 671 CDD BipA_TypA_II 266 363 IPR047042 -
Bach9g00560 671 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 57 268 IPR027417 -
Bach9g00560 671 FunFam GTP-binding protein TypA 453 547 - -
Bach9g00560 671 SUPERFAMILY EF-G C-terminal domain-like 368 451 IPR035647 -
Bach9g00560 671 CDD TypA_BipA 63 258 IPR047041 -
Bach9g00560 671 Pfam Elongation factor G C-terminus 460 543 IPR000640 -
Bach9g00560 671 Gene3D - 61 259 IPR027417 -
Bach9g00560 671 NCBIfam translational GTPase TypA/BipA 63 663 IPR006298 GO:0003924|GO:0005525
Bach9g00560 671 Pfam Elongation factor Tu GTP binding domain 62 255 IPR000795 GO:0003924|GO:0005525
Bach9g00560 671 SUPERFAMILY Translation proteins 208 364 IPR009000 -
Bach9g00560 671 CDD BipA_TypA_C 462 542 IPR035651 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00560 Bach-Chr9 3918886 3927223 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00560 62 186 Eukaryotic Initiation Factors Gene Family AT3G22980 42.748 1.52e-25 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00560 K06207 - gmx:100789218 1139.79