Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00542 ATGCTTCTTCTCTTTGTATTGCTTTTATCTTTCTCTTCTCCTCCCCTCACTCTCTCTCTAAACCAAGATGGTCTCTTTCTCTGGCAAGCCAAGCTTCAACTCTCCGATCCTGCCAATGCACTCTCCAACTGGACTGAGCGCGATGCCACTCCCTGCGCCTGGAATGGCGTCATTTGCAACAGTACCACTGGCCAGGTCACTGAGCTCAACCTCGACAGCTCGGAGCTCCAGGGTCCCTTCCCCATCTCTCTCTGTCGCATCCCTTCCCTCTCTGTCATCTCTCTCTACGACAACTCCATCAATTCATCTCTCACCCCCAATATAGCCAACTGTACTAATCTCCAGCGCCTCAACCTCTCCTCAAACCTCATAGTGGGTTCCATCCCCGAAACGCTCTCCCAAATCCCAGCTCTCCGCTACCTGGACCTCTCTTGTAACAACTTCTCCGGCGACATTCCAGCACGTTTCGGTGAGTTCCAGAAACTCGAAACGCTTAAGCTAGTTAATAATTTGCTAAATGGAACAATACCCAGTTTTCTTAGCAACATATCTACCCTGAAATTCCTTCAGCTTGCTTATAACCCCTTTACCCCGAGTCGTATACCGAGTGAATTCGGTAACTTGACGAATCTTGAGGAGCTTTGGCTCAGTAATAGCCATCTTATCGGTTCAATTCCGTCAGAATTGACCCGTCTCACTAAGCTTAAGAACCTTGACTTGTCCGGCAACAAACTCAGAGGGTCTATCCCAAGTTCAATTATCGAGTTCAAGAGCATAGTACAAATTGAGCTCTTTGATAACTCTCTCTCCGGCGTGATACCAGCGGGAATGTCCCACTTGACGACTTTGAGAAGATTTGATGCATCAACGAACCAGCTAACCGGGTCTATTCCTGATGAATTGTGCAGTTTGCCACTTGAATCCCTTAATTTGTACGAAAATAGGCTTGAAGGGTCATTGCCGGCAAGTATAGCCCGGTCTCCGAATCTATACGAGCTGAAGTTGTTTAACAACAACCTCAGTGGACCATTGCCCAGTGATCTCGGCAAAAACTCGCCTTTGCAGTCTATTGACGTTTCCTATAATCAATTTTACGGTGAAATCCCGGCGAACTTGTGTGAACGGGTCGCCTTGGAATCCCTTATTCTTTTACACAATTCGTTTTCTGGGGAAATCCCCGACAGTCTCGGAAAATGTCTGAGCTTGTACCGGGTTCGGCTTAAGAATAATAAGCTTTCTGGCATGGTTCCTGATGCTTTCTGGGGTCTACCTCATCTGTATTTGCTCGAGCTTCTTGATAATTCTCTATCTGGGCAAATTTCTAGTGCAGTTTCTGGTGCAAGTAATCTGTCAGTTCTATTAATTTCGAACAATCACTTTTCTGGCTCGATTCCTCATGAAATTGGGTCGTTGAAAAATCTCGTTGAATTTGTTGCCCACCATAACAATCTTACTGGTGGGATTCCAGCCAGTATGGTGAAGCTGAGCCAGTTGGGTAACCTTGATCTCAGTGATAATCAACTTTCTGGGAAAATTCCAGGGGGCATTGATGCTTTAACGAAGCTCAATGAGCTTAATTTGGCAAATAATAAGTTGGATGGTGAAATCCCAAGAGAAATTGGCAGCTTGCCAGCGCTTAATTATCTTGATCTTTCTGGAAATGATTTATCTGGTGAAATCCCACTTGAGTTGGGAAATTTGAGGCTCAATTTGCTAAATTTGTCAAACAATCAGCTTTCTGGGAAAATTCCTCCTTCTTTTGCTAATCGGAATTATATTAAGAGTTTTGTGGGAAATCCCGGCCTCTGTGGTGACCTCTCTGGACTTTGTCCAAGCCATGGTGAAAGTAAAAACAGGAAGAATTTGTGGATTTTCCGATCAATGTTCATACTTGCTGGAATTGTGTTAGTGGTTGGGGTTGTCTGGTTTTACTTCAAATACAGGAACTTGACGAAGATGAAAAAGGGATTTGCCATATCAAAGTGGAAGTCATTTCATAAGCTAGGATTCAGTGAGTTTGAGATTGTTAAATTGCTGAACGAAGATAATGTAATTGGAACCGGAGCGTCTGGGAAGGTCTACAAAGTAGTGCTTAGTAATGGTGAAGTAGTGGCAGTGAAGAAACTACGGGGAGCAACTAAGAAAGAAGAAACCAGTGTTGGTTCTGAAAAAGATGTATTTGATGTCGAAGTTGAAACGCTGGGGAAGATTCGGCACAAGAATATTGTGAGGCTGTGGTGCTGCTGCAACAACGGCGACAGCAAGCTTCTAGTATATGAATACATGCCAAATGGGAGCTTGGCAGATTTGTTGCATAGTAGCAAAAAGAGCTTGTTGGATTGGCCAACTAGACAAAAAATCGCTATTGATTCTGCTGAGGGGCTTTCCTATTTGCATCATGATTGTGTCCCCCCAATTGTTCACAGGGATGTTAAATCTAGCAATATATTGTTAGATGGAGATTTTGTGGCAAAGGTTTCTGATTTTGGAGCCGCCAAAATTGTTAATGGAGTCGGCCAAGGTGCAGAATCCATGTCTGTGATTGCAGGATCTTATGGCTACATCGCGCCAGAATATGGATATACTCTTCGGGTGAATGAAAAGAGTGATATTTACAGCTTTGGCGTGGTGCTTTTGGAATTGGTAACTGGGAGGCCCCCCGTTGATGCAGAATATGGGGAGAACAATCTGGTAAATTGGGTATCTTCCACATTGGATCAGAAAGGGATAGAACATGTGGTTGATCCCACATTGGATACCATTTGCATGGAAGAAATAATGAAGATGCTGGAAGTGGGACTTGTTTGCACCAGTTCTCTTCCAATAAACAGGCCATCCATGAGAAAAGTGGTGAAAATGTTGCACGAATCGTCTCCTGCTCTCAAATCCAAATCTATTAAGAAGGATGGCATACTATCCCCTTATTATCATAATGAAGAGGACACTGATCGGGGACACATTGTCTGAGCTATCAATTTTGTCTGCCTGCTTTAGTAATCTAACATTGCCCTAAGTTGGGTAGAAATGTTTGGGGACCAATTAATTAGTTTTAGTTCTAGAGGACACCATCAAGTGTAGGAAGAGCTGCTGTGTTATGTACCATTTTCTTAGATTTACCTTCTATCAATTATTGGGTATAATATAACCAAATTGGCATTATACTATTATTTCC 3172 0.4335 MLLLFVLLLSFSSPPLTLSLNQDGLFLWQAKLQLSDPANALSNWTERDATPCAWNGVICNSTTGQVTELNLDSSELQGPFPISLCRIPSLSVISLYDNSINSSLTPNIANCTNLQRLNLSSNLIVGSIPETLSQIPALRYLDLSCNNFSGDIPARFGEFQKLETLKLVNNLLNGTIPSFLSNISTLKFLQLAYNPFTPSRIPSEFGNLTNLEELWLSNSHLIGSIPSELTRLTKLKNLDLSGNKLRGSIPSSIIEFKSIVQIELFDNSLSGVIPAGMSHLTTLRRFDASTNQLTGSIPDELCSLPLESLNLYENRLEGSLPASIARSPNLYELKLFNNNLSGPLPSDLGKNSPLQSIDVSYNQFYGEIPANLCERVALESLILLHNSFSGEIPDSLGKCLSLYRVRLKNNKLSGMVPDAFWGLPHLYLLELLDNSLSGQISSAVSGASNLSVLLISNNHFSGSIPHEIGSLKNLVEFVAHHNNLTGGIPASMVKLSQLGNLDLSDNQLSGKIPGGIDALTKLNELNLANNKLDGEIPREIGSLPALNYLDLSGNDLSGEIPLELGNLRLNLLNLSNNQLSGKIPPSFANRNYIKSFVGNPGLCGDLSGLCPSHGESKNRKNLWIFRSMFILAGIVLVVGVVWFYFKYRNLTKMKKGFAISKWKSFHKLGFSEFEIVKLLNEDNVIGTGASGKVYKVVLSNGEVVAVKKLRGATKKEETSVGSEKDVFDVEVETLGKIRHKNIVRLWCCCNNGDSKLLVYEYMPNGSLADLLHSSKKSLLDWPTRQKIAIDSAEGLSYLHHDCVPPIVHRDVKSSNILLDGDFVAKVSDFGAAKIVNGVGQGAESMSVIAGSYGYIAPEYGYTLRVNEKSDIYSFGVVLLELVTGRPPVDAEYGENNLVNWVSSTLDQKGIEHVVDPTLDTICMEEIMKMLEVGLVCTSSLPINRPSMRKVVKMLHESSPALKSKSIKKDGILSPYYHNEEDTDRGHIV 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00542 988 SUPERFAMILY RNI-like 213 585 - -
Bach9g00542 988 ProSitePatterns Serine/Threonine protein kinases active-site signature. 806 818 IPR008271 GO:0004672|GO:0006468
Bach9g00542 988 Gene3D Ribonuclease Inhibitor 175 276 IPR032675 -
Bach9g00542 988 Gene3D Phosphorylase Kinase; domain 1 660 761 - -
Bach9g00542 988 Gene3D Ribonuclease Inhibitor 277 613 IPR032675 -
Bach9g00542 988 Pfam Protein kinase domain 681 951 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach9g00542 988 PRINTS Leucine-rich repeat signature 543 556 - -
Bach9g00542 988 PRINTS Leucine-rich repeat signature 235 248 - -
Bach9g00542 988 FunFam Receptor-like protein kinase HSL1 662 761 - -
Bach9g00542 988 SUPERFAMILY L domain-like 43 299 - -
Bach9g00542 988 SMART LRR_typ_2 543 567 IPR003591 -
Bach9g00542 988 SMART LRR_typ_2 232 256 IPR003591 -
Bach9g00542 988 SMART LRR_typ_2 112 135 IPR003591 -
Bach9g00542 988 SMART LRR_typ_2 280 304 IPR003591 -
Bach9g00542 988 SMART LRR_typ_2 495 518 IPR003591 -
Bach9g00542 988 SMART LRR_typ_2 208 231 IPR003591 -
Bach9g00542 988 SMART LRR_typ_2 87 111 IPR003591 -
Bach9g00542 988 SMART LRR_typ_2 519 542 IPR003591 -
Bach9g00542 988 FunFam Receptor-like protein kinase HSL1 305 612 - -
Bach9g00542 988 ProSitePatterns Protein kinases ATP-binding region signature. 685 708 IPR017441 GO:0005524
Bach9g00542 988 ProSiteProfiles Protein kinase domain profile. 679 961 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach9g00542 988 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 20 183 - -
Bach9g00542 988 SUPERFAMILY Protein kinase-like (PK-like) 679 954 IPR011009 -
Bach9g00542 988 SMART serkin_6 679 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach9g00542 988 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Bach9g00542 988 Pfam Leucine rich repeat 110 147 IPR001611 GO:0005515
Bach9g00542 988 Pfam Leucine rich repeat 497 556 IPR001611 GO:0005515
Bach9g00542 988 Gene3D Ribonuclease Inhibitor 20 174 IPR032675 -
Bach9g00542 988 FunFam Leucine-rich receptor-like protein kinase family protein 201 299 - -
Bach9g00542 988 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 762 970 - -
Bach9g00542 988 Pfam Leucine Rich Repeat 569 588 IPR001611 GO:0005515
Bach9g00542 988 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 258 955 - -
Bach9g00542 988 Gene3D Transferase(Phosphotransferase) domain 1 762 973 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00542 Bach-Chr9 3830713 3834048 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00542 15 988 Receptor kinase-like Gene Family AT1G28440 60.931 0.0 1194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bach9g00542 Pkinase 2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00542 - - mnt:21393816 1316.6