Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00536 GTTTATTTCATGAATTCTCAGTGCAGCAATTGCTCTTTCTAGCCTGCTCAGTTGTACTGTAAAGGATGGCTTCTTTATTCAAGGATCCTACCAAGCTTTCGGCATATCGAGATAGAAGATTTCCTGGATCACAAGAGGAATTTGAACATGCACTTGAGACATCTACTACTGCTTATGTGGGAAATATGTCGTTTTACACTACAGAAGAACAAGTTTATGAACTCTTTTCCCGTGCTGGAGAAATAAAGAAAATCATTATGGGCTTGGATAAGAACTCAAAAACACCTTGCGGCTTTTGCTTTGTGTCATATTACTCTCGTGAAGATACTGAGGATGCTGTCAAATATATGAGTGGGACAATACTTGATGATCGTCCCATTCGTGTTGATTTTGACTGGGGATTCCAGGAAGGTCGACAATGGGGCCGGGGTCGTAGTGGTGGGCAGGTGCGTGATGAATATCGAACTGATTATGATCCAGGTAGAGGTGGTTACGGTAAGTTAGTTCAAAAAGAGTTGGAAGCACAAAGGCAGCTTGTAGATTATGGTGCGGGTTCTTTGGGCTCTTTCCCACCAGTTATGTCACATTCCTATGGTAGACATGGCGGAGGCCATGGTCATGGTGGCTCTCATCGGCATGGTAGAGATTACTATCGGAAAAGACACAGAGATGACGACCGTCATGCACACGAGCCCTCTAAAAGAACATCAGATCCTGAATCTCGGAGGAACTCTGATCATGACTCTAGACCGGAGAAAAATCCACGATTTCGTGAGAGTGGTGATTCAGATGACGACGACGATGAGGATCGAATAAGGCGATCGTAG 827 0.4438 MASLFKDPTKLSAYRDRRFPGSQEEFEHALETSTTAYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNSKTPCGFCFVSYYSREDTEDAVKYMSGTILDDRPIRVDFDWGFQEGRQWGRGRSGGQVRDEYRTDYDPGRGGYGKLVQKELEAQRQLVDYGAGSLGSFPPVMSHSYGRHGGGHGHGGSHRHGRDYYRKRHRDDDRHAHEPSKRTSDPESRRNSDHDSRPEKNPRFRESGDSDDDDDEDRIRRS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00536 253 PANTHER 20 KD NUCLEAR CAP BINDING PROTEIN 2 248 IPR027157 GO:0000339|GO:0005846|GO:0045292
Bach9g00536 253 Coils Coil 249 253 - -
Bach9g00536 253 MobiDBLite consensus disorder prediction 120 143 - -
Bach9g00536 253 Gene3D - 6 150 IPR012677 -
Bach9g00536 253 CDD RRM_NCBP2 37 113 IPR034148 -
Bach9g00536 253 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 34 112 IPR000504 GO:0003723
Bach9g00536 253 MobiDBLite consensus disorder prediction 124 138 - -
Bach9g00536 253 FunFam Nuclear cap-binding protein subunit 2 4 150 - -
Bach9g00536 253 MobiDBLite consensus disorder prediction 197 253 - -
Bach9g00536 253 SUPERFAMILY RNA-binding domain, RBD 22 144 IPR035979 GO:0003676
Bach9g00536 253 MobiDBLite consensus disorder prediction 171 253 - -
Bach9g00536 253 SMART rrm1_1 35 108 IPR000504 GO:0003723
Bach9g00536 253 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 37 106 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00536 Bach-Chr9 3786463 3790014 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00536 33 109 Eukaryotic Initiation Factors Gene Family AT1G49760 27.273 8.20e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00536 K12883 - zju:107411315 383.259