Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00524 TAGCCGAGCATTCTTTAATCCCTTTATCTCAAGCACCAATGCCTGCACAGAAGCGGTCTTTGGCAGAGGCTCTGGACGAGGGAGAGACTTCACAGCTCTACCACCAGCGCCATGCCAAGCAATCTCAGCGCGACCGACAACTCAAGAGTGAGGAGGGACGAGATGAGGAAGATGAACAGAAGCAGCATCAGCTGGAGGAAGAAGGAGATGGAGAAGATGGAGGACAACAGCTACACCAGCAGGAAGAAGACAAAGATCAACCAGAGGATTCTGAGGAAAGCCCATCTTCTGGTCCTGAAGAAAAATCCGAATTTGTGACTGTTGAGCTTCCAGAAATTCGTAAAGATGTGCAATGTCCAATTTGCCTTGGTATTATTAAGAAAACACGAACTGTTATGGAATGCTTGCATAGATTTTGCAGGGAATGCATTGACAAGTCAATGCGACTAGGGAACAATGAATGCCCTGCTTGCCGCACACACTGTGCCAGTCGTCGTTCTTTGAGGGATGATCCTAACTATGATATGCTAATTGCAGCTTTATATCCAGATATTGAGAAGTATGAGGAAGAGGAGCTTGAATTTCGTGAAGAGGAGAAGACACGCAATAAGCAGATTCAAGCTTCAATTGCAAAAGTGGTTCAACGGCAATCTGAAGCACTGGTTAAAAGACGTAATAAAGATACACCAGGTCCATTTGTAACAAGATCTCAGCGCAATCAACGAAATGTTCAGTCTAGGAGACAAAACCAAGCGATTGATCTTCATGGATCCGATAATGATGAGGAAAATGACAACAATGGAGAAAAAGACTCGTCTTCTACTGATGAGCGGTGTGCAGAACTCAGCAAGAGAAGGCGAAAGAGACGGGCCAGAGTTCGCCCTTCTTTGGCCTCATCATCAATGGCAAGCCCTGATGGTGCAGGTATGGACAGTGATGTGGATATAGGCAGAGAAAATAGAGGAATTTCTTCAAGGCAGGCGTCAAAACCTCGAAAGCTTACTTGGGGAAGGGGAGGTTTCAGGAGCCACACACGACATGGTATAGGCGCTGGTGGCAATAACAAGAGCACCCGCAGTGCTCGATTGTCCAAGTTGGTTGATTACCTCCGAAACTTAGATGAAAATGATGATGAGTTGGATGTCCATCTCATGCTTGTTTCTTTGGATAAACAAACAACACCATGTTTGGAGCAGCCGCACCTTTGCTGTCGGCCAACATTGTCTGTCAAGCACCTTTGTGAATATGTGGCTTGTCAGACACCTTTGCTATCTGAAGAAGTTGAGATATTGGCAGTTAAAGGATGTAACAGTATAAATTGTGATAAGTCAGCTGGTGAGACTTCATCCTCCATGTATGAGCTGACAATATTGGCTGTAGATCCTTGCAAAGATGAACTGGAAATTTTGCAAGGACATGAAACTTTGGCAGGGCTCAGATCCAAATGCATATTTAAAAGGGAGCATATGATTCTGGCATACAGGCGGAAGGAGGCAATGGAAGTTTAA 1508 0.4503 MPAQKRSLAEALDEGETSQLYHQRHAKQSQRDRQLKSEEGRDEEDEQKQHQLEEEGDGEDGGQQLHQQEEDKDQPEDSEESPSSGPEEKSEFVTVELPEIRKDVQCPICLGIIKKTRTVMECLHRFCRECIDKSMRLGNNECPACRTHCASRRSLRDDPNYDMLIAALYPDIEKYEEEELEFREEEKTRNKQIQASIAKVVQRQSEALVKRRNKDTPGPFVTRSQRNQRNVQSRRQNQAIDLHGSDNDEENDNNGEKDSSSTDERCAELSKRRRKRRARVRPSLASSSMASPDGAGMDSDVDIGRENRGISSRQASKPRKLTWGRGGFRSHTRHGIGAGGNNKSTRSARLSKLVDYLRNLDENDDELDVHLMLVSLDKQTTPCLEQPHLCCRPTLSVKHLCEYVACQTPLLSEEVEILAVKGCNSINCDKSAGETSSSMYELTILAVDPCKDELEILQGHETLAGLRSKCIFKREHMILAYRRKEAMEV 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00524 489 ProSitePatterns Zinc finger RING-type signature. 122 131 IPR017907 -
Bach9g00524 489 PANTHER OS11G0578200 PROTEIN 1 485 IPR044592 -
Bach9g00524 489 MobiDBLite consensus disorder prediction 1 96 - -
Bach9g00524 489 MobiDBLite consensus disorder prediction 218 240 - -
Bach9g00524 489 MobiDBLite consensus disorder prediction 9 96 - -
Bach9g00524 489 Pfam Zinc finger, C3HC4 type (RING finger) 105 145 - -
Bach9g00524 489 MobiDBLite consensus disorder prediction 241 270 - -
Bach9g00524 489 Coils Coil 35 55 - -
Bach9g00524 489 ProSiteProfiles Zinc finger RING-type profile. 106 146 IPR001841 -
Bach9g00524 489 CDD RING-HC_RING1-like 103 168 - -
Bach9g00524 489 SUPERFAMILY RING/U-box 96 161 - -
Bach9g00524 489 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 57 176 IPR013083 -
Bach9g00524 489 MobiDBLite consensus disorder prediction 203 345 - -
Bach9g00524 489 SMART ring_2 106 145 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00524 Bach-Chr9 3721098 3726229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00524 99 169 C3H Transcription Factor Family AT3G23060 35.135 7.33e-07 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00524 K10695 - gmx:100776547 603.208