Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00518 ATGTCACTGCAGGCTCTCAAGGAAACTCTTAGACCCTGCACAACCCAATCTTCTGCATCTATAAGTCAAACACAGTCTTCAATTTTCCTAGATTCTGAAATAGCAATCCCTAGAAAACCCCCGAAATCCTCTGTCACTCAGCAGCTTCGTCGCCTGCAAGATCCACTTTCTGCTCCACCAATTCAGCCTCACAATTTACAGAAGCGAGAAAGAGAAAGGGAGCAGAAAAGCGGTGAACGTCAGGATGAGGAAGAATATGAAGAAAAGGAAGATCCAAAGCTAAAGAGGGCAAGATATGGTGGACCTAAATTGCCCCAATTTCAGTTTGATCATACAGGACCCTTTGAGCCTCTGCTCTTGTCTTCGCATGGAGAAGTTCCAGTGATACAGGTTCCTGCATCTATCAACTGCAGATTGCTTGAACATCAAAGAGCGGGAGTGAGGTTTTTGTATGGTTTATACAAGAACAATCATGGAGGCGTTCTTGGAGATGACATGGGTCTGGGGAAGACCATACAAACAATAGCTTTTCTTGCTGCAGTGTTCGGTAAAGATGGAGAGCATGTGCCCAAGGGAAATCAAGAAGAGAAGAGAAATCCTGTAGCAATAATATGCCCAACTTCTGTTATTCACAACTGGGAGAGTGAATTCTCGAAGTGGGCTTCCTTTAGTGTTTCTATTTATCATGGTGCAACTCGGGATCTGATATATGATAAATTGGAGGCACATGGAGTGGAGATTCTTATTACCAGTTTTGACACATTCAGAATTCATGGCACCGCCTTGTCAGATATCAATTGGGACATTGTGATTATTGATGAGGCCCATCGACTTAAGAATGAGAAATCTAAACTGTACACAGCATGTTTGGAAATTAAAACCCGGAAACGCTTTGGTCTTACTGGAACCATAATGCAAAATAAGATCATGGAATTGTTTAATCTCTTTGATTGGGTTGCACCTGGATCCCTTGGAACACGGGAACACTTTCGAGAGTTCTATGATGAACCCCTCAAGCATGGTCAGAGGTCAACGGCGCCTGAAAGATTTGTACAAATTGCTAATGAGCGAAAACAACACCTTGTGTCAGTTCTTCAGAAATATATGTTAAGAAGGACTAAGGAAGAAACTATTGGGCATCTGATGATGGGGAAAGAAGATAACGTTGTGTTCTGTGCCATGAGTGAATTGCAAAAACGGGTTTACGGGAGAATGTTGCAACTTCCTGACATCCAGTGTCTTATAAATAAGGACCTTCCTTGTAGTTGTGGAAGCCCTCTTACACAAGTTGAATGCTGTAAGAGGATTGTGCCAAATGGAATTATTTGGCCTTATCTTCACAGAGATAACCCTGATGGTTGTGATTCGTGCCCCTTTTGTCTTGTGCTTCCTTGCCTTGTCAAGCTACAACAGATAAGCAATCACCTTGAACTGATTAAGCCAAACCCCAAAGATGACCCAGAGAAACAAAGAAAAGATGCAGAGTTTGCTGAAGCTGTCTATGGCCCTGATATTGATTTGGTGGGTGGGAACGCGCAGAATGAGAGTTTTATGGGTCTAAGTGATGTGAAACATTGTGGCAAAATGCGAGCAATTGAGAAGTTATTGTATTCGTGGATTTCGCATGGTGACAAAGTTCTTTTGTTTAGCTATTCCGTGAGGATGTTGGACATATTGGAGAAATTTCTTATAAGAAAAGGCTACTGCTTCTCAAGACTTGATGGATCCACTCCCCCTAACTTACGTCAATCTCTGGTTGATGACTTCAATTCAAGTCCTAGCAAACAAGTATTTCTTATATCAACCCGAGCTGGAGGCCTTGGATTAAACCTTGTGAGTGCAAATCGTGTGGTGATATTTGATCCCAACTGGAATCCCGCGCAAGACTTACAGGCTCAAGACAGGTCCTTCCGTTTTGGGCAGAAGCGGCATGTTGTGGTGTTCCGCCTTCTTGCTGCTGGTTCACTTGAAGAGCTTGTTTATTCCCGTCAAGTGTACAAGCAGCAGTTGTCAAACATTGCTGTCTCTGGAAAGATGGAAATACGATATTTTGAAGGTGTCCAGGATTGCAGGGAATTTCAAGGAGAGCTTTTTGGCATATGCAACTTGTTTCGAGATTTATCTGACAAGCTATTTACTAGTGAAATCATTGAATTACATGAAAAGCAAGGAAAAGAACATGGGTATATAACAGAACAAGAGCTAATTGATCATGAAAAAAGCTTTGCCCCTTCGAAAGAAGCTCGCATGACATTTAAACCGGATCTCGAAGAACTTGGCATTGTCTATGCTCATCGAAATGAAGACGTCGTCAACTTCGGACCTGGGACTCAAGGGAAGATAGATACAAGCATCTTGGGAAGTGATAGCCTAACCGAGCCGCGTATTCCTATGCATCGAAAAAACAAACCTAATTTTGTAGATAAGAAACATGAAGTTTCTTTAATTGATCAGAGGAAAAGAATCCAATATAAACTGCTTGCTAGTTCTATGGGCATGGAAGAACTTGAATTTAGCAAGTGGTTATTATCTGCAACTCCATCAGATAGAGAGAAAGTACTTGAAGACTTTAAGAAGAGAAAGAATATGCCTAACAGTTGAAATATAGTTATTATCATACAAGGCAAAACAAATACATGCCTTCCATGTAATACAACTTGATTATTGGTATAAATAGAAAGACTGTATATAATGATGTATAGTCCTTTTTTCTCTCGTTC 2720 0.4121 MSLQALKETLRPCTTQSSASISQTQSSIFLDSEIAIPRKPPKSSVTQQLRRLQDPLSAPPIQPHNLQKREREREQKSGERQDEEEYEEKEDPKLKRARYGGPKLPQFQFDHTGPFEPLLLSSHGEVPVIQVPASINCRLLEHQRAGVRFLYGLYKNNHGGVLGDDMGLGKTIQTIAFLAAVFGKDGEHVPKGNQEEKRNPVAIICPTSVIHNWESEFSKWASFSVSIYHGATRDLIYDKLEAHGVEILITSFDTFRIHGTALSDINWDIVIIDEAHRLKNEKSKLYTACLEIKTRKRFGLTGTIMQNKIMELFNLFDWVAPGSLGTREHFREFYDEPLKHGQRSTAPERFVQIANERKQHLVSVLQKYMLRRTKEETIGHLMMGKEDNVVFCAMSELQKRVYGRMLQLPDIQCLINKDLPCSCGSPLTQVECCKRIVPNGIIWPYLHRDNPDGCDSCPFCLVLPCLVKLQQISNHLELIKPNPKDDPEKQRKDAEFAEAVYGPDIDLVGGNAQNESFMGLSDVKHCGKMRAIEKLLYSWISHGDKVLLFSYSVRMLDILEKFLIRKGYCFSRLDGSTPPNLRQSLVDDFNSSPSKQVFLISTRAGGLGLNLVSANRVVIFDPNWNPAQDLQAQDRSFRFGQKRHVVVFRLLAAGSLEELVYSRQVYKQQLSNIAVSGKMEIRYFEGVQDCREFQGELFGICNLFRDLSDKLFTSEIIELHEKQGKEHGYITEQELIDHEKSFAPSKEARMTFKPDLEELGIVYAHRNEDVVNFGPGTQGKIDTSILGSDSLTEPRIPMHRKNKPNFVDKKHEVSLIDQRKRIQYKLLASSMGMEELEFSKWLLSATPSDREKVLEDFKKRKNMPNS 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00518 866 Coils Coil 69 89 - -
Bach9g00518 866 MobiDBLite consensus disorder prediction 1 101 - -
Bach9g00518 866 Pfam Helicase conserved C-terminal domain 528 640 IPR001650 -
Bach9g00518 866 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 531 685 IPR001650 -
Bach9g00518 866 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 151 322 IPR014001 -
Bach9g00518 866 MobiDBLite consensus disorder prediction 65 98 - -
Bach9g00518 866 SMART helicmild6 557 640 IPR001650 -
Bach9g00518 866 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 266 693 IPR027417 -
Bach9g00518 866 MobiDBLite consensus disorder prediction 1 31 - -
Bach9g00518 866 Pfam SNF2-related domain 156 411 IPR000330 GO:0005524|GO:0140658
Bach9g00518 866 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 125 372 IPR027417 -
Bach9g00518 866 CDD SF2_C_SNF 522 651 - -
Bach9g00518 866 Gene3D - 384 693 IPR027417 -
Bach9g00518 866 FunFam Switch 2 121 371 - -
Bach9g00518 866 Gene3D - 119 371 IPR038718 -
Bach9g00518 866 PANTHER SNF2/RAD54 FAMILY MEMBER 16 802 - -
Bach9g00518 866 SMART ultradead3 135 330 IPR014001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00518 Bach-Chr9 3687254 3691848 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00518 159 670 RAD5 or RAD16-like Gene Family AT1G02670 23.656 3.14e-26 113
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach9g00518 SNF2_N 6.3e-54 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00518 K20098 - gmx:100781003 1363.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00518 9 3687254 3691848 Bach9g00518 9 3687254 3691848 ECH