Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00516 ATGGACCGGCAGCTAGGAAGCCATTCTTCTTCTTCTACCAAAATCGAAAGAAGGATCATTGAGAAAAATAGAAGAAACCAAATGAAGATCCTCTACTCCAAACTCAACTCTCTGCTCCCAAGTTATAATTCCAAGGAGACTTTGCCACTGCCTGATCAAGTAGATGAGGCTATTAGCTACATAAAGAGCTTAGAGACAAAGGTGAAGATGGCCAAGGAGAAGAAAGAAAGCTTAACTGTCAGGAAAAGGTCACATACTTCTTGTTCGACTGCTTTTGAAACCATGGGAAGCCTAAAATCGCCAAAGATTGAAATTCACGAAGTGGCTTCCTCACTTGAGATTGTTCTGATCAGTGGGTCGGATAACCAGTTCGTTTTCTATGAAATCATTCGCATACTTCATGAAGAAAACATAGATGTCGTGAGTGCTAATTCCTCACTTGCTGGGGGTTCAATGTCTCACGTTGTGCATGCACAGATTGGAGAATCTTCGCTTCAATTCGGAGCTACAAAAGTGAGTGAGAGATTGAAAAGGTTTGTATATGGATCCGCCAGTGATGTGGAAAGTCAGCTGGAGCTGTGGGATTTTGAAATTGGTACTGATGATACATGGGATTTCAAAATCCTACAGTAA 633 0.4155 MDRQLGSHSSSSTKIERRIIEKNRRNQMKILYSKLNSLLPSYNSKETLPLPDQVDEAISYIKSLETKVKMAKEKKESLTVRKRSHTSCSTAFETMGSLKSPKIEIHEVASSLEIVLISGSDNQFVFYEIIRILHEENIDVVSANSSLAGGSMSHVVHAQIGESSLQFGATKVSERLKRFVYGSASDVESQLELWDFEIGTDDTWDFKILQ 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00516 210 Coils Coil 54 81 - -
Bach9g00516 210 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 12 64 IPR011598 GO:0046983
Bach9g00516 210 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 10 87 IPR036638 GO:0046983
Bach9g00516 210 SMART finulus 18 70 IPR011598 GO:0046983
Bach9g00516 210 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 10 181 - -
Bach9g00516 210 FunFam Transcription factor bHLH162 6 90 - -
Bach9g00516 210 Gene3D - 6 93 IPR036638 GO:0046983
Bach9g00516 210 Pfam Helix-loop-helix DNA-binding domain 16 65 IPR011598 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00516 7 180 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 36.649 1.43e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach9g00516 HLH 4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00516 - - gmx:100805461 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00516 9 3673883 3674696 Bach9g00516 9 3673883 3674696 ECH