Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00500 ATGGACTTTGATCGGTACTTTGAGGAGGTTGTGCCCCAAATTGATTCTTTTGGAGAAGATAGAAATGGCTTTGCAAGCTTTGACTGCAACATCTGCCTTGATACGGTGCAAGATCCAGTGGTCACTCTCTGCGGTCATCTCTACTGCTGGCCTTGTATTTACAAGTGGCTTCGTTTACATTCCATTTCTTCAGAAAACGAAGAGCGGCAGAGACCAGAGTGCCCAGTTTGTAAATCACAAGTTTCTCAAACATCCCTGGTTCCATTGTACGGACGTGGCGTCACTAGAAAATCTTGTAAAGGCAAGGCCTCTCCTGTAGGACTGGCCATACCGCCAAGACCCCTTGGCCCCACTTGGGTGCTTAATTCATTATCATCAACATCAACAACTAACACTAGCACTATTCCCCAACCAGCTTCACAATTTTATCGTCGCCATTATCCTTATCATCCTCAACAATTCAACTCAGCTCCAACCAATTACACTACATCTGGAGTTTTCGGAGAGATGATATCCGCGAGGGTGTTTGGCAATCAAGTAACAGACATGTACACTTACCCGGATTCATATCGTCTTGCTCGGAACAATAATCCAAGGATCAGAAGGCACTTAATGCAAGCTGATATGTCACTCAGTAGAATCTGTTTCTTCCTCCTTTGTTGCGTACTTTTGTGTCTTCTCTTATTCTGA 690 0.4435 MDFDRYFEEVVPQIDSFGEDRNGFASFDCNICLDTVQDPVVTLCGHLYCWPCIYKWLRLHSISSENEERQRPECPVCKSQVSQTSLVPLYGRGVTRKSCKGKASPVGLAIPPRPLGPTWVLNSLSSTSTTNTSTIPQPASQFYRRHYPYHPQQFNSAPTNYTTSGVFGEMISARVFGNQVTDMYTYPDSYRLARNNNPRIRRHLMQADMSLSRICFFLLCCVLLCLLLF 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00500 229 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED 23 226 IPR045103 GO:0005783|GO:0006511|GO:0061630
Bach9g00500 229 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 18 91 IPR013083 -
Bach9g00500 229 ProSiteProfiles Zinc finger RING-type profile. 29 78 IPR001841 -
Bach9g00500 229 SMART ring_2 29 77 IPR001841 -
Bach9g00500 229 CDD RING-HC_AtRMA-like 27 79 - -
Bach9g00500 229 Pfam Zinc finger, C3HC4 type (RING finger) 29 77 IPR018957 GO:0046872
Bach9g00500 229 SUPERFAMILY RING/U-box 28 83 - -
Bach9g00500 229 ProSitePatterns Zinc finger RING-type signature. 44 53 IPR017907 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00500 Bach-Chr9 3558314 3559003 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00500 25 229 C3H Transcription Factor Family AT4G28270 40.952 7.10e-45 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00500 K10666 - gmx:100785491 269.626