Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00496 ATGGGTGTGCTTCAATCCACACTTCTCTACTTGATTTTGCTACACTCATGCAAGATTGCTGCTAGCAAGGATGAGGAATGGAGGTCTGCCACTGCAACATACTCCAAAGAAACAGAGGATTCTCTCCTCTCCGAAGGAGCTTGTGGTTATGGAGACCTTCACAAGGCCAGCTATGGGAGGCATAGTGCAGGATTAAGCAGCATGTTGTTCAACAAAGGGAGTATTTGTGGAACTTGCTATGAGATCAGATGTGTAGACCACATCTTGTGGTGCTTGCCGGGTAGCCCATCTATAGTTGTTACTGCTACAGATTTCTGCCCTCCAAATTATGGACTTTCAGTTGATTATGGGGGATGGTGCAATTTTCCAAGAGAACATTTTCAGATGTCAGAAGCTGCTTTTGCTGAAATTGCCATGACCAAAGCTGATACTGTGCCAATTCAGTACAGAAGAGTGAAGTGTCAAAGAAGCGGTGGACTGAAATTTACAATCAGTGGAAGTTCTCACTTCTATCAAGTCCTGATTAGCAATGTAGGGTTGGATGGCGAAGTGGTTGCTGTGAAAGTGAAGGGGTCAAGAACAGGGTGGATACCCATGACAAGGAATTGGGGACAAAATTGGCATTGCAATGCCAACCTTCAAGGACAACCTCTGTCCTTTGAGGTGACCATCAATGGTGGGAGAACTCTAACATCTTACAATGTTGCCCCAGCAAACTGGCAATTTGGGCAAACATTTGAAGGAAACAGTTTTAGCATGAGAAGATTAAATACTTAG 777 0.4427 MGVLQSTLLYLILLHSCKIAASKDEEWRSATATYSKETEDSLLSEGACGYGDLHKASYGRHSAGLSSMLFNKGSICGTCYEIRCVDHILWCLPGSPSIVVTATDFCPPNYGLSVDYGGWCNFPREHFQMSEAAFAEIAMTKADTVPIQYRRVKCQRSGGLKFTISGSSHFYQVLISNVGLDGEVVAVKVKGSRTGWIPMTRNWGQNWHCNANLQGQPLSFEVTINGGRTLTSYNVAPANWQFGQTFEGNSFSMRRLNT 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00496 258 FunFam Expansin 159 251 - -
Bach9g00496 258 SMART dpbb_1 62 149 IPR007112 -
Bach9g00496 258 PRINTS Expansin signature 57 71 IPR002963 GO:0009664
Bach9g00496 258 PRINTS Expansin signature 234 250 IPR002963 GO:0009664
Bach9g00496 258 PRINTS Expansin signature 170 191 IPR002963 GO:0009664
Bach9g00496 258 PRINTS Expansin signature 158 170 IPR002963 GO:0009664
Bach9g00496 258 PRINTS Expansin signature 84 95 IPR002963 GO:0009664
Bach9g00496 258 PRINTS Expansin signature 134 147 IPR002963 GO:0009664
Bach9g00496 258 PRINTS Expansin signature 98 108 IPR002963 GO:0009664
Bach9g00496 258 PRINTS Expansin signature 205 226 IPR002963 GO:0009664
Bach9g00496 258 PRINTS Expansin signature 117 134 IPR002963 GO:0009664
Bach9g00496 258 SUPERFAMILY Barwin-like endoglucanases 12 177 IPR036908 -
Bach9g00496 258 Gene3D - 13 155 IPR036908 -
Bach9g00496 258 CDD DPBB_EXPA_N 26 154 - -
Bach9g00496 258 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 159 IPR007112 -
Bach9g00496 258 PRINTS Expansin/Lol pI family signature 196 210 IPR007118 GO:0005576
Bach9g00496 258 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Bach9g00496 258 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Bach9g00496 258 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Bach9g00496 258 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Bach9g00496 258 PRINTS Expansin/Lol pI family signature 142 158 IPR007118 GO:0005576
Bach9g00496 258 Pfam Lytic transglycolase 63 149 IPR009009 -
Bach9g00496 258 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 169 248 IPR007117 -
Bach9g00496 258 Gene3D - 159 251 IPR036749 -
Bach9g00496 258 SUPERFAMILY PHL pollen allergen 156 248 IPR036749 -
Bach9g00496 258 Pfam Expansin C-terminal domain 161 237 IPR007117 -
Bach9g00496 258 PANTHER EXPANSIN-A15 11 250 IPR002963 GO:0009664
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00496 Bach-Chr9 3541252 3542254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00496 4 251 Expansin Gene Family AT4G38210 62.000 3.20e-118 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00496 - - gmx:100804002 449.899