Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00490 ATGGACGCGGGTAAGAACAGTGGTAAATCCAACGAAGGTGCTGATGATACTCAGAAGATTACTCAGATGGGAGAAAGCCAAGATTGGGGAATTGACAAGGGCAAGGATCTAGATTTTAGCCTTCAGAGGCGGCAATGGAAACCAGTTTTTGATGAAGCGTCCGCGTCACATAGCCCTCTCAAGAAGATCCGTAGCCCGGAACGTCAAAACCCAAATCCATCATCCTCTGTTTCACTGAAACTTCCTTCCTCCTCTTTCACCTCTGCAATCCCTCCTATTACCGCGTCATCTCTCAATGTGTGTCCTCCTTCATCGTCTTCTAGAATTGTGTTTCCTTTTGCCTATGACGGGTCTCAAAATCCTCTACAATTTCCCCACCAATTTGGAACCACAAATTTTCCTCTGTTTCGTCCACCGATTCAACCGACACTGCAAAATCAGCAGCAACAGATGATATCTTTTGGTCCCCAGCAACAAAACATCATGTACCCACAATTCCTTGTCCCAGAGTCTGCCATGTCCCAGCAACAGCAACAACACCAGCAGCAGCTTCTCCAGTACTGGAGTGACACACTGAATCTAAGTCCACGAGGAAGGATGATGATGATGAATAGGTTAGGGCCAGATGGCAGGCCATTGTTCAGGCCACCGGCACAGCCTTTAAATACTACTAAGCTGTACAGGGGAGTGAGGCAACGCCATTGGGGGAAATGGGTGGCTGAAATTCGTCTTCCTCGCAATAGAACTCGCCTCTGGCTAGGCACATTTGATACTGCAGAAGATGCTGCCTTGGCGTACGATCGTGAAGCCTTTAAGTTAAGAGGTGAGAATGCAAGACTCAATTTTCCTGAGCTTTTCCTCAACAAGGATAAATCACCATCAACTGCACAGTCTGCTTCAATACCAGCTGCTTCTTCTCCCCCAACTCCGCATGAAGGTTCCACTTCCATGTCAAGTCAGAACTCAAAGCAACCCGAGCCAGTTCAAGAAGGGCTTAACGTGCAGGCTATGAACACCGAGAGGATGCCACCGCCGGTGCTGCCGCAACAGGAAGAGAGTACTGACAATGAGTCAGGATTTGGGTCGAGCGACGCTGCTGTGAGTGACGAAGTTCAGGCAGCGGCTGCAAGTGCTGAAACAGGGGAAGGCATTTCACAGTCGCAGGAACTGGTATGGGGCGAAATGGCAGCTTGGTTCAATGCTATTCCAGAAGGTTGGGGTCCCGGAAGCCCTGTATGGGATGATTTGGACACAAACAATAATCTTCTCTTGCCATCACAGCTTCCTTTTGTTAACCCAAATCAACAAGAATTTAGTGATGCTGATACTCAGAGACAAGATGATAACACAGGACCAGGTTCTTCAACTTCTTCTGCTTGTCCCACGAGGCCCTTCTTCTGGAAGGGTCAAGATTGA 1416 0.4845 MDAGKNSGKSNEGADDTQKITQMGESQDWGIDKGKDLDFSLQRRQWKPVFDEASASHSPLKKIRSPERQNPNPSSSVSLKLPSSSFTSAIPPITASSLNVCPPSSSSRIVFPFAYDGSQNPLQFPHQFGTTNFPLFRPPIQPTLQNQQQQMISFGPQQQNIMYPQFLVPESAMSQQQQQHQQQLLQYWSDTLNLSPRGRMMMMNRLGPDGRPLFRPPAQPLNTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFLNKDKSPSTAQSASIPAASSPPTPHEGSTSMSSQNSKQPEPVQEGLNVQAMNTERMPPPVLPQQEESTDNESGFGSSDAAVSDEVQAAAASAETGEGISQSQELVWGEMAAWFNAIPEGWGPGSPVWDDLDTNNNLLLPSQLPFVNPNQQEFSDADTQRQDDNTGPGSSTSSACPTRPFFWKGQD 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00490 471 ProSiteProfiles AP2/ERF domain profile. 226 283 IPR001471 GO:0003700|GO:0006355
Bach9g00490 471 Gene3D AP2/ERF domain 226 284 IPR036955 GO:0003700|GO:0006355
Bach9g00490 471 PRINTS Ethylene responsive element binding protein signature 227 238 IPR001471 GO:0003700|GO:0006355
Bach9g00490 471 PRINTS Ethylene responsive element binding protein signature 249 265 IPR001471 GO:0003700|GO:0006355
Bach9g00490 471 SMART rav1_2 226 289 IPR001471 GO:0003700|GO:0006355
Bach9g00490 471 MobiDBLite consensus disorder prediction 424 463 - -
Bach9g00490 471 MobiDBLite consensus disorder prediction 290 385 - -
Bach9g00490 471 MobiDBLite consensus disorder prediction 290 336 - -
Bach9g00490 471 MobiDBLite consensus disorder prediction 1 34 - -
Bach9g00490 471 SUPERFAMILY DNA-binding domain 226 284 IPR016177 GO:0003677
Bach9g00490 471 MobiDBLite consensus disorder prediction 349 365 - -
Bach9g00490 471 FunFam Ethylene-responsive transcription factor 2 225 284 - -
Bach9g00490 471 Pfam AP2 domain 227 275 IPR001471 GO:0003700|GO:0006355
Bach9g00490 471 MobiDBLite consensus disorder prediction 424 471 - -
Bach9g00490 471 MobiDBLite consensus disorder prediction 50 82 - -
Bach9g00490 471 CDD AP2 225 285 IPR001471 GO:0003700|GO:0006355
Bach9g00490 471 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 19 416 - -
Bach9g00490 471 MobiDBLite consensus disorder prediction 65 82 - -
Bach9g00490 471 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00490 Bach-Chr9 3519007 3520422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00490 1 416 AP2-EREBP Transcription Factor Family AT2G20880 40.952 2.02e-64 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bach9g00490 AP2 3.5e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00490 - - qsa:O6P43_028790 589.726