Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00452 ATGGTGAGAGCTCCTTTCTATGACAAAAATGGAGTGAAGAAAGGAGCATGGAGTAACGAAGAGGATGAGAGGTTAAGGGCATATGTTGACAAGCATGGTCATCCTAATTGGCGTCAACTCCCTAAGCTTGCTGGATTAGCAAGGTGTGGAAAAAGTTGCAGGCTTCGTTGGATGAATTACTTGCGGCCAAATCTTAAACATGGGAGCTACACCAAAGAAGAAGAGGAAATCATCATTAAACTTCATCAACAACTGGGAAATAAATGGTCCCTCATTGCTGAAAAATTACCCGGAAGGACAGACAACGAGATAAAAAACCATTGGCACAGCCACCTACACAAGCGCAATAATACGAGGAAATTCGAGATCAACTTGAAGCCTATTGATGCTTCTGAACAAGAAATAACTTCGTACACAGAATCTCATGAAGATCAAAGTGTTGTTGTTTCTGATGATCGCTTCCAGAATGTTTCAGAAAGCTCATCGTCAATGTCGACGGAAACATCTTATACCCAAGGAAATTACTCTCCTGCCCTTGCCTCTAATCATGCACAATCAGCCAGCAGAGAAGATAGTTTTGCCTCCTGGGAAACAATAGAAGGATTTGGCTCTGATTTTTGGACGGAACCATTTATATCAGATAATAATTCATATAGTCTGGGTATTTATCGAGCAGACCCAGGAGAGATTGCCTACTATTTTGACGGTACAGATTTGTTGTACCAAGAAATGGGAGAACTACCAATTATAAGTTAAATGAAAGAAAAGTTTTTGCTTTCATTTGAAATTTCCGTGTGTTGAAATGGAAAGAAGTCGTTATGTTGTGGAATTTGTGTCGGAGTTGTGTTTGTGTCTTGCTTTTTACCTTTCTCCTTTTCATTTTTGGTGCTGAATATATGAGCTATGCTTAGTTTTAATGAAAAACAA 927 0.3927 MVRAPFYDKNGVKKGAWSNEEDERLRAYVDKHGHPNWRQLPKLAGLARCGKSCRLRWMNYLRPNLKHGSYTKEEEEIIIKLHQQLGNKWSLIAEKLPGRTDNEIKNHWHSHLHKRNNTRKFEINLKPIDASEQEITSYTESHEDQSVVVSDDRFQNVSESSSSMSTETSYTQGNYSPALASNHAQSASREDSFASWETIEGFGSDFWTEPFISDNNSYSLGIYRADPGEIAYYFDGTDLLYQEMGELPIIS 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00452 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach9g00452 251 CDD SANT 69 112 IPR001005 -
Bach9g00452 251 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach9g00452 251 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Bach9g00452 251 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach9g00452 251 MobiDBLite consensus disorder prediction 136 183 - -
Bach9g00452 251 CDD SANT 16 61 IPR001005 -
Bach9g00452 251 FunFam Transcription factor RAX3 7 67 - -
Bach9g00452 251 Gene3D - 69 115 - -
Bach9g00452 251 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bach9g00452 251 SMART sant 66 114 IPR001005 -
Bach9g00452 251 SMART sant 13 63 IPR001005 -
Bach9g00452 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach9g00452 251 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 181 - -
Bach9g00452 251 Gene3D - 7 67 - -
Bach9g00452 251 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00452 Bach-Chr9 3264914 3266106 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00452 1 115 MYB Transcription Factor Family AT1G06180 68.696 8.91e-55 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach9g00452 Myb_DNA-binding 4e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00452 K09422 - gmx:100781032 256.914