Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00448 ATGAGGAGACGCCCACGCTGTGACAAAAGTGGACTGAAAAAAGGAAGATGGACACCGGAGGAAGATATAAAATTGATAGGTTATGTCACTAGGTATGGCCACTGGAATTGGCACCTGCTCCCCAAGTTTGCAGGTCTTGAAAGGTGTGGGAAGAGTTGCAGATTGAGATGGCTGAATTATCTAAGGCCCAATATCAAAAGAGGGAACTACACTGAAGAAGAGGACGATATTATTATCAAACTGCATGACAAGCTTGGCAATAGATGGTCTGAGATTGCCGCTCATTTACCAGAAAGATCAGATAACGAGATAAAAAATCACTGGCACGCAACTCTTAAGAAGCGCTTTCTACAGAATTCAGTCACAGATGAAAAAGCTGAAGTCTCCAGGCACGAGAGAGACTCGGTGTTAAAAACTGATTTGAAGGGTACTACCCCATCTACTTCCCAGATTTCCGATGCTTCCCTGTTGTCCCCTCAGACATCATCCAGTGAATTCTCCTCAGGCATAAGCATGACTACAGAGACCACTGCAGCAAGTAATGAAAATGCTTTCATAGAGAACGATTTTGCTTTTTCGGATGCATTTACAAGTTCAACTCTCTGGTTAGAACCATATATGGCTGACATTTCCTACGTCCCAAATGAAATATTGGCATCCATGGTGGCTGAACACGAATATGCATATCCCGTGTATGATGCACAACTTTGGAGTGAAAATATACAGTACCAGTATAATGGCTTATTCTAA 750 0.4253 MRRRPRCDKSGLKKGRWTPEEDIKLIGYVTRYGHWNWHLLPKFAGLERCGKSCRLRWLNYLRPNIKRGNYTEEEDDIIIKLHDKLGNRWSEIAAHLPERSDNEIKNHWHATLKKRFLQNSVTDEKAEVSRHERDSVLKTDLKGTTPSTSQISDASLLSPQTSSSEFSSGISMTTETTAASNENAFIENDFAFSDAFTSSTLWLEPYMADISYVPNEILASMVAEHEYAYPVYDAQLWSENIQYQYNGLF 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00448 249 SMART sant 13 63 IPR001005 -
Bach9g00448 249 SMART sant 66 114 IPR001005 -
Bach9g00448 249 MobiDBLite consensus disorder prediction 140 170 - -
Bach9g00448 249 CDD SANT 69 112 IPR001005 -
Bach9g00448 249 CDD SANT 16 61 IPR001005 -
Bach9g00448 249 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bach9g00448 249 MobiDBLite consensus disorder prediction 123 170 - -
Bach9g00448 249 Gene3D - 6 67 - -
Bach9g00448 249 Gene3D - 68 139 - -
Bach9g00448 249 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 183 - -
Bach9g00448 249 FunFam Transcription factor RAX3 7 67 - -
Bach9g00448 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bach9g00448 249 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bach9g00448 249 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bach9g00448 249 Pfam Myb-like DNA-binding domain 67 109 IPR001005 -
Bach9g00448 249 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bach9g00448 249 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bach9g00448 249 MobiDBLite consensus disorder prediction 123 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00448 Bach-Chr9 3236307 3237710 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00448 1 121 MYB Transcription Factor Family AT3G02940 62.810 6.75e-54 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach9g00448 Myb_DNA-binding 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00448 K09422 - gmx:100778518 259.61