LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bach9g00424	ATGGAATTGATAAGACGCAGTTATGTGGTTTTTTACGTCATTCTCCTCTGTGCGTTGACCAAAGAGGGTTCAGAGGGAAAGAGATGGAAGCCTGAGGAATTTGTTAGAGATTGGGGTGATTCGTCATCGTCGCTTGAAACAGAAGGAAAGGTAGAGCAGGTGTGGGCACATTGCAGGAAAGAACTGATAGAGACGAACAATGCTGGTGAAGATTTTGACATGCGTCGACTGGAAAGGAGCAGTGACATGAGATCTGTACATCTACTAGGCAAGAACATACACAAAGCAACTGGACTTCTGCCTCCCCATATAAAAGAGAACCTTTGGAATTGCATAAGAAAGAGAACTCTTTCTATTCCTGTTTCTGAAGAGAAGGAAGACTCTAGAGAATGGTTGACGAAGCATTTTGGGTCACTTTCTGAATTGCCTAGTGGTCATAGAAGAGATTTGGTTGCTGAGTCACCAGATAATCAGATGGCTCCAAGCCCTACTGCTCCTGCTCAATCTCCAGGGCCTGCAATAGCAACTCCAACTCACGGTCCATCACCAGCGAGTTCAACTCAAGGTCCATCACCAGCCAGTTCAACTCATGGTCCACCACCAGCCCGTTCTTCACCACCAACAGTAGAGCCCCCTGCTGATGATTTTTTGTTATCACCACAAATGTATCATTCATTTCCACCACCTCTGCCTCCTAAGAGTTATCCACCGATTCCAAATGCTCCTCCAGCTCCTGAGCCGGATTCTGGTATGAAGAAAACATTATTTATTGTTGCTGTTGGTGCAGCTTCAGCAGCATTTTTGACCTTGATAGCCCTTATCTTGTGCTGGCCTAAGGGTAATAGCAAGAAAGTAGATCCAAGAGTGGAGCGAAAAGATGAAAGCCCTCTACTCATATTACCAATGAGTGATTTTTCTACTGGTTCAGAAAAGTTTGTTGTTTTGGGGAATTCGGATAAGAAGGAATCTGGTATTAACAAGGGAAAGGTTCCTTCTGCTGTTAGCCATTTGTCCACAAGGACTGAAGATCCCAATACCTCAATAGCCGAAGATACATTGTCAGAAGGTATGGGACAATTATCAGCCCAACCTTTAAAATCCCCATTAGCGAGTTCCGAACCTACACCCCCTGGGCCACCACAGCCACTGCCTGCTCCTGCTTCTTGCCCTCCACCACCTCCAAGACCAAGAGTTGCTCAACCTCCCCCTGCTCCTCCAAAACCATTGGCTGCTAAGATAAAGCAACCTTCACTTCTTGGACCACTGCGTAAGGAGCAGGATGGTTCTAGTGAGGGCATTGAATCTGATGCTCCAAAACCCAAATTAAAGCCATTCTTTTGGGATAAGGTTAATGCAAAGCCTGATCAAGCTATGGTCTGGCATGAGATCAATGCAGGATCATTCCAGTTCAATGAGGAAAAGATAGAGTCTTTGTTTGGTACTGCCAACCAGAACAGGAATGAACGGAGGAAAGATTCACCATCTCTGGAACCTTCAGTCCAGTACATTCAGATTATCGATCCTAAGAAAGCACAGAATCTATCAATTCTTTTACGAGCTCTGAATGTGACAACAGAAGAAATTATTGATGCCCTTAAAGAAGGTAATGAGATTCCTCTTGAGCTCCTCCAAACGTTGTTGAAGATGGCACCTACGACAGACGAGGAACTGAAACTTAGGTTGTTCGCAGGCGACCTTTCTGAACTTGGCCCCGCAGAGAGGTTTCTCAAGGTCTTAGTTGAGATTCCATACGCCTTTAAACGACTAGAATCTCTGATGTTCATGATTTCCCTTCCAGAAGAGATCTCAAGCATTAAGGAGTCCTTTGCAACACTAGAGGTTGCTTGTAAAGAACTTAGGAAAAGCAGACTATTCTTGAAACTATTAGAAGCAGTTCTCAAAACAGGCAATCGCATGAATGATGGCACCTATCGTGGTGGTGCTCAAGCATTTAGGCTTGACACTCTCCTGAAGCTGTCTGATGTAAAAGGAACCGATGGCAAGACAACACTATTGCACTTTGTGGTTCAGGAGATTGTACGTTCTGAGGGCATTAGAGCCGTACGTACATCGAAGGCGAGCCGAAGCCTATCTAGCGTAAACACAGATGACTTTGAGAAGGATGGCGCCGAGGAATCAGAAGAGCAATACCGCAACCTTGGTCTACAGGTGGTATCAGGTTTAAGTGATGAGCTGGAAGATGTCAAAAAGGCAGCAATAATAGATGGTGATTTGCTAACAGCTGCAGTATCAAAAGTTGGCCAGTCATTGTTAAAGGCAAAAGATTTCCTGAACACTCAGTTGAAGGATCTTGATGAAGACAGTGAATTCCGAGGTTCGCTGGCCAGTTTCGTGGAGAAAACAGAAGCTGATGCGACGTGGATACTGGAGGAAGAGAAGCGGATAATGGCTCTGGTGAAGAGCACCGCAGATTATTTCCACGGGACTGCAGGAAAGGATGAAGGGTTGCGCTTGTTTGTGATAGTTCGTGATTTCTTGATTATATTAAATAAGGTGTGTAAAGAGGTGAAAGATACAACAACGACAACGAAGCCAAAGGTTCCAAAGAAAGACGCTCCATCCTCATCAGCTTCTCCAGACACTCATCATACGCCTTCTGACATGCACAGGCGACTATTTCCAGCAATTACAGAGCGGCGAGTGGATGATTCCAGTTCTGATTATGACGACGAGGACGACGAGAGCTCATCTCCATAG	2718	0.4518	MELIRRSYVVFYVILLCALTKEGSEGKRWKPEEFVRDWGDSSSSLETEGKVEQVWAHCRKELIETNNAGEDFDMRRLERSSDMRSVHLLGKNIHKATGLLPPHIKENLWNCIRKRTLSIPVSEEKEDSREWLTKHFGSLSELPSGHRRDLVAESPDNQMAPSPTAPAQSPGPAIATPTHGPSPASSTQGPSPASSTHGPPPARSSPPTVEPPADDFLLSPQMYHSFPPPLPPKSYPPIPNAPPAPEPDSGMKKTLFIVAVGAASAAFLTLIALILCWPKGNSKKVDPRVERKDESPLLILPMSDFSTGSEKFVVLGNSDKKESGINKGKVPSAVSHLSTRTEDPNTSIAEDTLSEGMGQLSAQPLKSPLASSEPTPPGPPQPLPAPASCPPPPPRPRVAQPPPAPPKPLAAKIKQPSLLGPLRKEQDGSSEGIESDAPKPKLKPFFWDKVNAKPDQAMVWHEINAGSFQFNEEKIESLFGTANQNRNERRKDSPSLEPSVQYIQIIDPKKAQNLSILLRALNVTTEEIIDALKEGNEIPLELLQTLLKMAPTTDEELKLRLFAGDLSELGPAERFLKVLVEIPYAFKRLESLMFMISLPEEISSIKESFATLEVACKELRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVQEIVRSEGIRAVRTSKASRSLSSVNTDDFEKDGAEESEEQYRNLGLQVVSGLSDELEDVKKAAIIDGDLLTAAVSKVGQSLLKAKDFLNTQLKDLDEDSEFRGSLASFVEKTEADATWILEEEKRIMALVKSTADYFHGTAGKDEGLRLFVIVRDFLIILNKVCKEVKDTTTTTKPKVPKKDAPSSSASPDTHHTPSDMHRRLFPAITERRVDDSSSDYDDEDDESSSP	905

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bach9g00424	905	MobiDBLite	consensus disorder prediction	194	208	-	-
	Bach9g00424	905	SMART	it6_source	432	851	IPR015425	-
	Bach9g00424	905	MobiDBLite	consensus disorder prediction	370	410	-	-
	Bach9g00424	905	Pfam	Formin Homology 2 Domain	435	835	IPR015425	-
	Bach9g00424	905	PANTHER	FORMIN-RELATED	246	887	IPR027643	GO:0003779\|GO:0030036\|GO:0045010\|GO:0051015
	Bach9g00424	905	MobiDBLite	consensus disorder prediction	870	891	-	-
	Bach9g00424	905	MobiDBLite	consensus disorder prediction	846	905	-	-
	Bach9g00424	905	Gene3D	Formin, FH2 domain	438	864	IPR042201	-
	Bach9g00424	905	SUPERFAMILY	Formin homology 2 domain (FH2 domain)	445	847	-	-
	Bach9g00424	905	ProSiteProfiles	Formin homology-2 (FH2) domain profile.	432	862	IPR015425	-
	Bach9g00424	905	MobiDBLite	consensus disorder prediction	853	869	-	-
	Bach9g00424	905	MobiDBLite	consensus disorder prediction	427	442	-	-
	Bach9g00424	905	MobiDBLite	consensus disorder prediction	153	247	-	-
	Bach9g00424	905	MobiDBLite	consensus disorder prediction	319	442	-	-
	Bach9g00424	905	MobiDBLite	consensus disorder prediction	179	193	-	-
	Bach9g00424	905	MobiDBLite	consensus disorder prediction	224	246	-	-
	Bach9g00424	905	MobiDBLite	consensus disorder prediction	332	369	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bach9g00424	Bach-Chr9	3055658	3060420	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bach9g00424	396	889	FH2 protein (formin) Gene Family	AT5G54650	62.028	0.0	576

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bach9g00424	-		-	cave:132182641	814.683