Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bach9g00422 | GCTTACGATCACAGTCCAACGCCAACGCCAACGCGAGTGAAGTTCCCTCACTGTTCATTACCTGCACAACACACTATGGACATCTACTCTTGCGACAACTCCAACTGGCTTTGTGATTATGGCTTTGATGTCGCCGTTGGGGCCAGTGACTTCCCGGCTCCAGCCTCCGCTGGTTTCACATGGCTACCTCAAACCTGCAAAAATTCTTCCGATTTCAGCGAATACTCACTGGCTAGCTCACATGTCTTGGAGAATGGCCCTCCAAAACGGTTGAGGTCTGAATCATGTTCATCTGGCTCCAAGGCATGTCGTGAGAAACTGCGAAGGGATAAACTGAACGAGAGGTTCTTGGAACTGAGTTCAATTTTGGAGCCTGGTAGGCAGCCCAAAACAGACAAAGTTGCTATGTTAAGTGATGTAATTCGAATGGTGACCCAATTAAGAAGTGAAGCACAGAAGCTGAAGAAGGAAAATGATGAATTGCTTACAAAGATTAAAGAATTGAAGGCTGAGAAGAATGAGCTTCGTGATGAGAAGAATAAGCTAAAGATGGACAAAGAAAACTTGGAGCAGCAGGTCAAAGCAATGAATGCACAGCCCAACTTCCTCTCTCATCCCTCTGCTGCATCAGCTGCTAAAGGGCAAAGCCACAAGCTGATGCCTTACATTGGTTACCCTGGAATTGCGATGTGGCAATTCATACCGCCTGCTGCACTGGACACATCAAAGGATCATCTGCTTCGCCCTCCCGTTGCTTAACGTGGTTACCATCGCTTTACTGTATTTGCACTTCGCTTGTGTTACATGTTATCGATTATGTCAGTGTGGGTTTCCTAAAGTCTGTGGTTGACATGGAAATAAATTCTGTTTATAAACTGGTTTCAACCCAATTATAATCTAGATTATTGAATAAAATGCTGTGTGTTATGCTTGAAGCAA | 939 | 0.4483 | MDIYSCDNSNWLCDYGFDVAVGASDFPAPASAGFTWLPQTCKNSSDFSEYSLASSHVLENGPPKRLRSESCSSGSKACREKLRRDKLNERFLELSSILEPGRQPKTDKVAMLSDVIRMVTQLRSEAQKLKKENDELLTKIKELKAEKNELRDEKNKLKMDKENLEQQVKAMNAQPNFLSHPSAASAAKGQSHKLMPYIGYPGIAMWQFIPPAALDTSKDHLLRPPVA | 227 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bach9g00422 | 227 | Gene3D | - | 75 | 148 | IPR036638 | GO:0046983 | |
Bach9g00422 | 227 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 77 | 147 | IPR036638 | GO:0046983 | |
Bach9g00422 | 227 | PANTHER | BHLH TRANSCRIPTION FACTOR | 8 | 227 | IPR044818 | GO:0003700|GO:0006355|GO:0006879|GO:0046983 | |
Bach9g00422 | 227 | CDD | bHLH_AtILR3_like | 76 | 151 | - | - | |
Bach9g00422 | 227 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 71 | 122 | IPR011598 | GO:0046983 | |
Bach9g00422 | 227 | Pfam | Helix-loop-helix DNA-binding domain | 75 | 122 | IPR011598 | GO:0046983 | |
Bach9g00422 | 227 | SMART | finulus | 77 | 128 | IPR011598 | GO:0046983 | |
Bach9g00422 | 227 | Coils | Coil | 112 | 174 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bach9g00422 | Bach-Chr9 | 3035767 | 3038484 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bach9g00422 | 3 | 227 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT5G54680 | 54.622 | 5.38e-78 | 233 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Bach9g00422 | HLH | 8e-08 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bach9g00422 | - | - | gmx:100806838 | 297.745 |