Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00422 GCTTACGATCACAGTCCAACGCCAACGCCAACGCGAGTGAAGTTCCCTCACTGTTCATTACCTGCACAACACACTATGGACATCTACTCTTGCGACAACTCCAACTGGCTTTGTGATTATGGCTTTGATGTCGCCGTTGGGGCCAGTGACTTCCCGGCTCCAGCCTCCGCTGGTTTCACATGGCTACCTCAAACCTGCAAAAATTCTTCCGATTTCAGCGAATACTCACTGGCTAGCTCACATGTCTTGGAGAATGGCCCTCCAAAACGGTTGAGGTCTGAATCATGTTCATCTGGCTCCAAGGCATGTCGTGAGAAACTGCGAAGGGATAAACTGAACGAGAGGTTCTTGGAACTGAGTTCAATTTTGGAGCCTGGTAGGCAGCCCAAAACAGACAAAGTTGCTATGTTAAGTGATGTAATTCGAATGGTGACCCAATTAAGAAGTGAAGCACAGAAGCTGAAGAAGGAAAATGATGAATTGCTTACAAAGATTAAAGAATTGAAGGCTGAGAAGAATGAGCTTCGTGATGAGAAGAATAAGCTAAAGATGGACAAAGAAAACTTGGAGCAGCAGGTCAAAGCAATGAATGCACAGCCCAACTTCCTCTCTCATCCCTCTGCTGCATCAGCTGCTAAAGGGCAAAGCCACAAGCTGATGCCTTACATTGGTTACCCTGGAATTGCGATGTGGCAATTCATACCGCCTGCTGCACTGGACACATCAAAGGATCATCTGCTTCGCCCTCCCGTTGCTTAACGTGGTTACCATCGCTTTACTGTATTTGCACTTCGCTTGTGTTACATGTTATCGATTATGTCAGTGTGGGTTTCCTAAAGTCTGTGGTTGACATGGAAATAAATTCTGTTTATAAACTGGTTTCAACCCAATTATAATCTAGATTATTGAATAAAATGCTGTGTGTTATGCTTGAAGCAA 939 0.4483 MDIYSCDNSNWLCDYGFDVAVGASDFPAPASAGFTWLPQTCKNSSDFSEYSLASSHVLENGPPKRLRSESCSSGSKACREKLRRDKLNERFLELSSILEPGRQPKTDKVAMLSDVIRMVTQLRSEAQKLKKENDELLTKIKELKAEKNELRDEKNKLKMDKENLEQQVKAMNAQPNFLSHPSAASAAKGQSHKLMPYIGYPGIAMWQFIPPAALDTSKDHLLRPPVA 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00422 227 Gene3D - 75 148 IPR036638 GO:0046983
Bach9g00422 227 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 147 IPR036638 GO:0046983
Bach9g00422 227 PANTHER BHLH TRANSCRIPTION FACTOR 8 227 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Bach9g00422 227 CDD bHLH_AtILR3_like 76 151 - -
Bach9g00422 227 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 71 122 IPR011598 GO:0046983
Bach9g00422 227 Pfam Helix-loop-helix DNA-binding domain 75 122 IPR011598 GO:0046983
Bach9g00422 227 SMART finulus 77 128 IPR011598 GO:0046983
Bach9g00422 227 Coils Coil 112 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00422 Bach-Chr9 3035767 3038484 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00422 3 227 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 54.622 5.38e-78 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach9g00422 HLH 8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00422 - - gmx:100806838 297.745