Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00420 ATGGAACCTCTATGCGAGTTCTGTGGTGTGTCAAGAGCTGTGGTTTACTGCAAATCCGATTCTGCCCGTCTCTGCTTGAATTGTGATGGCTGTGTACATTCTGCAAATTCTTTGTCAGACAGACATCCTCGTTCACTCCTGTGTGATAAGTGCAATCTTCAGCCTGCAGTTGTCCGATGCATGGATGACAAATTGTCTGTTTGTCAAGGTTGTGACTGGAATCGAAACGCCTGTTCTGTATTGGGACACCGGCGCCAGGCATTGACTTGTTATACGGGTTGTCCCTCTTTGTCTGAATTATCTGAAATATGGTCTTCTGTTCTTGACACTACTTCTTTGGATGGTTTTAATAATGCTTGGGGGTCAGTTAATACATTGCCTAAAAATGATAGCTGCTCTACAAAGCGTTTGGAGGAACTGGATAATTATGGCTCTTTTGGCTTGGGGACTGGCAAGTTAAATGATATAGAATCGTCTGTTCGATATGAACCTTGGATGGGGCCATCTCCTTTAATTCCACCAAATCCAAATTACATGCCGTACTGCAGAGATCAACCTTTATTATTTCCTCAAGAATCAAGCTTGCCAAAGATGCAGGGGTGTCCTAATTTCAAGGATCTTGGAATTCAAGATGGTGATGGACTTTGTGAAAGTCTCAACATAGATGATATTCAATTAACTTTAGAAAGTAGTGATGAAATATTCGGATGCTCTCAAGGAGCCACCAGATACCAGCTTGAGGATGGAGGAATTGACTGTCTCTTAATGGAAAAGAACATATCAGTTACGGAATCTAATGTTCTTCCGGAGAGTGCATTGGAGGCATCATCACCAATCCAACAAGAATGTGTGCCTTTTCAGTCATCCAGGGCTAGTGGGTCAGCTAGTGTCATGCAGGCCATCAATGACAATACAAATTGTGTACTTATGAATCCTAGTTGCAACAGAAACATCAATATGGGATTTCCTCAGGGTCAAGTTCATTCAAGCTTATCACTCTCATTGTCCAACATCACTGGTGAAAGTAGTGCCACTGATTATCAAGATTGTGGTTTATCACCTGTGTTTCTGACAAGTAATACCCCGTGGGAATCAAATTTGGAGCCTGCATGCCCACAAGCGAGGGACAAAGCTAAAATGAGATACAAGGAGAAAAAGAAAACCCGAACGTTTGGTAAGCAAATAAGATATGCGTCTCGCAAAGCTCGAGCTGATACCAGAAAACGTGTGAAAGGTAGATTTGTGAAGGCTGGTGAAGCATATGATTATGACCCTCAGGTGACAACGAACTTCTAA 1296 0.4236 MEPLCEFCGVSRAVVYCKSDSARLCLNCDGCVHSANSLSDRHPRSLLCDKCNLQPAVVRCMDDKLSVCQGCDWNRNACSVLGHRRQALTCYTGCPSLSELSEIWSSVLDTTSLDGFNNAWGSVNTLPKNDSCSTKRLEELDNYGSFGLGTGKLNDIESSVRYEPWMGPSPLIPPNPNYMPYCRDQPLLFPQESSLPKMQGCPNFKDLGIQDGDGLCESLNIDDIQLTLESSDEIFGCSQGATRYQLEDGGIDCLLMEKNISVTESNVLPESALEASSPIQQECVPFQSSRASGSASVMQAINDNTNCVLMNPSCNRNINMGFPQGQVHSSLSLSLSNITGESSATDYQDCGLSPVFLTSNTPWESNLEPACPQARDKAKMRYKEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPQVTTNF 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00420 431 ProSiteProfiles CCT domain profile. 375 417 IPR010402 GO:0005515
Bach9g00420 431 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bach9g00420 431 Pfam CCT motif 375 417 IPR010402 GO:0005515
Bach9g00420 431 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 1 420 - -
Bach9g00420 431 CDD Bbox1_BBX-like 4 47 - -
Bach9g00420 431 SMART bboxneu5 1 47 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00420 Bach-Chr9 3023534 3025227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00420 1 429 C2C2-CO-like Transcription Factor Family AT3G21880 43.880 1.34e-105 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bach9g00420 CCT 1.3e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00420 - - gmx:100804738 621.313