Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00408 ATCCACATCGTGTCTTCATATACAATTCTCACCAAGCCGAAGTTCCATTGCTGAAAGTTTGGGCCCTTTTCTCTTCAAATGTATAAACTCCGGCTGTATTTGATGTCTGTGATAGACTTTTCTCAGCTGCTCAGTAGCAACGGGCGGTTTAGTAGTTTAGTCAAGTGCTTATTACCTTCAGGGAATTAATTCTGGTATCTGTATTAGTCTTTTCCCTACGTTCAGTCTTCTGGGTATGCAACAAAATGTAATATTTTCCACGTTTCATCCAGTTTTGCGTACTTGGTAGCACTGTGTTTGAACAAGCTTCAAATAAACTGCATCAAGTATGAAGCAGTCAATGGTTTTGCCACTGATAATTTGGATGTGGGTAATCCTTAGCGCTATTGCTCATTGCCGAGGGCCTGCAACTGTAAATATTGCTGCGGTTTTTACTGTAAATTCAGCCATAGGTCAAGCTGCAAAGATAGCGATGGAAACGGCCGTTTCTGATGTTAATGCAGACCCAAGAGTTCTCAACGGGACGAAATTGAAGTTGATAATAGAGGATGCAAATTGCAGCGTCTTTATGGGATCAATTGGAGCTTTTCGAGCACTTGAGAAAGGGATTGCAGCATTAATCGGTCCACAGTCATCTGGCATAGCTCATACGATTTCTCAAGTTGCAAATGGCCTCCAAGTTCCTCTTGTTTCATATGCTGCCTCTGACCCAACCTTGTCGTCCCTTCAGTATCCTTTCTTTTTCCGTACTACACAAAGTGGCTCTGAGCAAATGGCTGCAATGGCTAATCTAATTGACTTTTATGAATGGAAAGAAGTCATTGCAATCTTTGTGGATGATGATAATGGAAGAAATGGGATATCTGCTTTGGGCGACGAACTTGAGAAGAGGAGACTGAGGATTGCTCATAAATTACCTTTGAGAATTCAGTTTGATCTGGATGAAATCACCGAAGTGCTTAATGAATCTAAAGCGTATGGTCCTCGTGTCTATGTTGTTCATGTCAACCCGGATACTGGAGTCAGAACTTTTAGCATAGCTCACAAACTTAAAATGATGGCTAGTGACTATGTTTGGCTTGCTACAGACTGGCTCTCTACTACCCTAGATTCATTCTCCCCAGTGAATCAGACAACTCTGAGCATCCTCCAAGGCGTCGTTGGACTTCGCCAACACATCCCAGATTCTATTCAGAAGAGAAATTTTGTTTCTCGATGGAAAAAAATGCAGCAAGAACGTTCAACATTCACTGGCTTGAATGTCTATGGATTTTATGCATATGATACAATTTGGGCAGTTGCACGTTCAATTGATCAGTTTTTTGAAGTATACAAAAATGTTACATTCTCTTTCAGTAACTATAAGCTACGCCATTCAGAAGCTGCTGATATTATTCAGTTTGACAAGCTCAAAGTATTCGCTGGGGGATCTGATCTGGCTAACATATTATTCCAATCAAATTTTACTGGTGTGAGTGGTAAAGTTCAATTTGATTCAGAGAGGAACGTCATAAGCAGTGGTTATGATGTTATCAATATCAATCAGAGGGCAATTAGCAGGGTTGGTTATTGGTCTAAATCTTCTGGATTTTCAGTGTTACCTCCTAAAATTCATACTAAGAAAGTAAATAGCAATTTTTACAAAGATCAGAAACTTAACAACATTACTTGGCCAGGAGGACTGACGGGAAGGCCACGTGGCTGGGTGATTGCTCATAATGCAAGGCCACTGAAAATTGGAGTACCCAAGAGAGCAAGTTTTGTTGAATTTGTTACTGAACTTCCTCAGACTCATGAAATTCAGGGGTACTGCATTGATGTCTTCAAGAAAGCGTTGGAGTTCCTACCATATGCTGTTCCTTATGTATTTGAGCCTTTTGGGAATGGTCAGTCAAATCCCAATTATGATGATCTCGTGAGGACAGTTGCTGAAGATGTATATGATGCAGTTGTAGGAGACATTGCAATAGTGACAAACCGAACAAAGATTGTGGATTTTTCTCAGCCTTTTGCAACAAGTGGTCTTGTTGTTGTGGCTCCAATCAACAATGCAAAGTCAAGTGCTTGGGTGTTTATCAAGCCATTTACAACAGATATGTGGTGTGCCATTGCAGCTTCATTTATGATGATTGCAGTGGTCGTATGGATTCTCGAGCACCGAGTCAATGACGATTTCCGTGGTCCTCCTAAGAAGCAAGTTGTGACAATGTTTATGTTCAGCCTCTCAACGCTGTTTAAGACAAATCAGGAAAGGACAGTAAGCACACTTGGTCGATTGGTAATGATAGTATGGCTTTTCCTATTGATGGTGATCACAGCCAGCTATACAGCAAGCTTAACTTCAATTCTCACGGTGGAACAGCTTTCATCACCCATCACAGGAATCGATAGTTTGATTGCAAGTAACTTGCCCATAGGATACCAGGTAGGGTCATTTGCTTACAGCTATATGATCGAGAGTCTTTACGTGCAAGGAACAAGACTTGTTCCTCTAGGTTCCCCGGAAGAATATGCAAGAGCTCTGCAGCTAGGGCCTAGTGGTGGAGGGGTGGCTGCTATCGTAGATGAGCTTTCATACGTGGAGTTATTTCTGTCAACGCGAACTGATTTTGGTATTATTGGACAGCCATTCACCAAAAGCAGCTGGGGATTTGCTTTTTCAAGAGACTCCCCTCTTGCCATTGACGTGTCTACAGCAATCTTGAAACTTTCCGAAAATGGACAGCTTCAGAAGATACGCGAGAAGTGGTTCTGTAAGATGGGTTGTCCTGAAGAAAGGATGAGCAAGTCCGAGTCCAACCAACTTCACATGGTTAGCTTTTGGGGTCTATATCTGTCATGTGGTGTTGTCACTCTTGCAGCATTTCTGGTATTTGTGCTGCGAACAATTTGCCAATTTGTTCGCTACAAACGTAAGCATAAGGATCTTTCTTCTTCTACATCTTCACAGCCATCAAGTGGCCGCGGTTCCCAGGTTGTTTGTAACTTCTTTGACTTCATTGATAAGAAGGAAGAAGCTATCAAGAAGATGTTCACTCAACCAAACAACCCCCAACAGCAACCGAGCTGA 3070 0.4186 MKQSMVLPLIIWMWVILSAIAHCRGPATVNIAAVFTVNSAIGQAAKIAMETAVSDVNADPRVLNGTKLKLIIEDANCSVFMGSIGAFRALEKGIAALIGPQSSGIAHTISQVANGLQVPLVSYAASDPTLSSLQYPFFFRTTQSGSEQMAAMANLIDFYEWKEVIAIFVDDDNGRNGISALGDELEKRRLRIAHKLPLRIQFDLDEITEVLNESKAYGPRVYVVHVNPDTGVRTFSIAHKLKMMASDYVWLATDWLSTTLDSFSPVNQTTLSILQGVVGLRQHIPDSIQKRNFVSRWKKMQQERSTFTGLNVYGFYAYDTIWAVARSIDQFFEVYKNVTFSFSNYKLRHSEAADIIQFDKLKVFAGGSDLANILFQSNFTGVSGKVQFDSERNVISSGYDVININQRAISRVGYWSKSSGFSVLPPKIHTKKVNSNFYKDQKLNNITWPGGLTGRPRGWVIAHNARPLKIGVPKRASFVEFVTELPQTHEIQGYCIDVFKKALEFLPYAVPYVFEPFGNGQSNPNYDDLVRTVAEDVYDAVVGDIAIVTNRTKIVDFSQPFATSGLVVVAPINNAKSSAWVFIKPFTTDMWCAIAASFMMIAVVVWILEHRVNDDFRGPPKKQVVTMFMFSLSTLFKTNQERTVSTLGRLVMIVWLFLLMVITASYTASLTSILTVEQLSSPITGIDSLIASNLPIGYQVGSFAYSYMIESLYVQGTRLVPLGSPEEYARALQLGPSGGGVAAIVDELSYVELFLSTRTDFGIIGQPFTKSSWGFAFSRDSPLAIDVSTAILKLSENGQLQKIREKWFCKMGCPEERMSKSESNQLHMVSFWGLYLSCGVVTLAAFLVFVLRTICQFVRYKRKHKDLSSSTSSQPSSGRGSQVVCNFFDFIDKKEEAIKKMFTQPNNPQQQPS 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00408 913 CDD GluR_Plant 466 808 - -
Bach9g00408 913 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 30 869 IPR015683 -
Bach9g00408 913 Gene3D - 144 421 - -
Bach9g00408 913 Gene3D - 751 815 - -
Bach9g00408 913 PIRSF IGluLR_plant 1 913 IPR017103 -
Bach9g00408 913 Gene3D - 460 578 - -
Bach9g00408 913 SUPERFAMILY Periplasmic binding protein-like I 23 460 IPR028082 -
Bach9g00408 913 FunFam Glutamate receptor 705 812 - -
Bach9g00408 913 SUPERFAMILY Periplasmic binding protein-like II 446 808 - -
Bach9g00408 913 Gene3D - 579 714 - -
Bach9g00408 913 FunFam Glutamate receptor 144 302 - -
Bach9g00408 913 SMART GluR_14 467 810 IPR001320 GO:0015276|GO:0016020
Bach9g00408 913 FunFam Glutamate receptor 463 579 - -
Bach9g00408 913 FunFam Glutamate receptor 579 717 - -
Bach9g00408 913 Pfam Receptor family ligand binding region 46 405 IPR001828 -
Bach9g00408 913 Pfam Bacterial extracellular solute-binding proteins, family 3 469 808 IPR001638 -
Bach9g00408 913 Gene3D - 47 396 - -
Bach9g00408 913 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 42 58 - -
Bach9g00408 913 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 317 329 - -
Bach9g00408 913 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 102 130 - -
Bach9g00408 913 CDD PBP1_GABAb_receptor_plant 30 423 IPR044440 -
Bach9g00408 913 Pfam Ligand-gated ion channel 809 840 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00408 Bach-Chr9 2938661 2943725 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00408 15 913 Ion Channels AT2G32400 56.146 0.0 1038
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00408 K05387 - gmx:100796389 1305.43