Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00407 ATGATGATTCTTAGCGAATTGCAGGTTTTTGAAGCTTTTCTAGCAATGGAATTCCTCTTGATTACAAGGAACGGGCGCAAGGTTATAATCAGCAAATTATTCCTTGCGGTCTTTTGCCTGTGGATTCCCACGCAAGTTGTGGGTAGGACAGGAAATGCAACTGTAAATGCTACTGTTCCTTCAAGGCCAAGCGTTGTGAGAGTGGGGGCCCTGTTTACTATCAATTCGGTCATTGGAAGATCAGCTAAACCAGCAATCTTAGCTGCCGTTGATGATGTTAACGCTGATAAGAGCATCCTCCCTAACACTAAACTGGAAGTTATTTTACATGACACAAACTGCAGTGGGTTTCTTGGAACAGTAGAAGCTCTGCAGTTGATGGAGGATGAAGTCATTGCTGCTATTGGTCCACAGTCCTCTGGAATAGCTCATGTCATCTCCCATGTGGTTAATGAACTCCATGTACCCCTTCTGTCATTTGGGGCAACTGATCCTACCCTCTCAGCACTGCAGTACCCATATTTCCTTCGCACTACCCAGAATGACTATTTTCAAATGTATGGAATTGTAGACTTTGTTGACTACTACGGATGGAGGGAAGTCATTGCCATTTTTGTAGATGATGATAATGGAAGAAATGGAATTTCTGTACTGGGTGATGCCTTGGCAAAGAAACGTGCCAAGATCTCTTATAAGGCTGCCTTCAGTCCTGGAGTTAACACCAGTGAGATCACTGAATTGTTAGCTGGAGTGAACGAAATGGAATCACGGGTTTACGTTGTGCATGTTAATCCTGATACTGGTTTGAGAATTTTCTCTGTTGCTAAAAAACTAGGGATGGTGACTGCTGGCTACGTTTGGATTGCAACAGATTGGCTTCCTTCGTTGCTAGATTCGTCAGATCAGCGAGCTAACCCTGACATAATGAACCTCATACAAGGCGTTGTTGCTTTTCGCCATCACATTCCTGATACAGATCTCAAAAAGAGTTTTGTCTCTAGGATGAATAACGTAAAAGACAAGGAAACTGCAAGCTTCAATTCCTATGCATTTTATGCATATGATTCTGTTTGGTTAGTAGCTCGAGCTTTCGATGTTTTCTTGAATAATGGTGGAAATCTGTCTTTCTCTAATGACCCCAGGTTGCATGACACAAATGGAAGCTCGTTGCACTTATCATCACTTCGTGCTTTTGAAGGTGGCCCTCAATTTCTCCAGACAATCTTGGCAATGAACTTCACCGGTGTAAGTGGTCAAATTCAGTTCAATATGGATAAGAATTTGATTCGTCCAGCATATGACATTCTAAATATTGACGGAACTGGGATGCGTAGTATTGGTTATTGGTCTAATCACTCTGGTCTGTCAGTTGAGGTTCCTGAAATTTTATATCAGAAACCTCCTAATGCCTCAACCAGTAATCAAAAACTACTTAGTGTGCTATGGCCAGGAGGCACTACAACTAAACCTAAGGGATGGGTGTTTCCCTTCAATGGAAAGCCATTGCGCATAGCAGTGCCAAACCGAGTAGGCTACCAGGAGTTTGTCGCCAGAGACAAGCACTCGGGGGTAAAAGGTTATTGCATTGATGTGTTTGAAGCAGCCATAAAGTTGTTACCTTATGCTGTCCCACTGCAATATATATTATATGGAAATGGTGATAGAAATCCTGACTACACCGACCTTGTGAATCAGGTTGCACAAAATAACTTTGATGCAGCTGTCGGAGATGTTACAATTGTTACAAATAGGACGAGGATTGTGGATTTTACTCAACCGTACTTAGAATCAGGGCTGGTGGTAGTTGTTCCCGTCGAGGAGGTGAAGTCAAGCCCTTGGTCTTTCCTCAAGCCATTTACTGCTCAAATGTGGTGTGTCACCGGTGCCTTCTTTCTCTTTGTGGGAGCTGTTATATGGGTTCTCGAGCACCGGACGAATCATGAGTTCCGTGGTCCACCAAGGAAACAACTTATAACAATTTTTTGGTTTAGTTTCTCAACAATGTTTTTCTCACACAGGGAGACCACTGTGAGTAGTCTGGGACGATTGGTGCTAATCCTGTGGCTTTTTGTGGTGTTAATTATCAATTCAAGCTACACAGCTAGTTTAACATCCATCCTAACAGTGCAGCAACTGACATCACAAATTGAAGGAATTGACAGTCTGATATCAAGTAGTCAACCGATTGGAGTTCAAGATGGATCATTTGCGAAGAAGTATCTGACAAATGAGCTCAATATAGCAGAGTCTAGGATTGTTACGTTGAAAAACCAGCAAGATTATATTGATGCCCTTCAGCGTGGACCAAAAGGTGGAGGCGTAGTAGCTATTGTTGATGAACTTCCCTACATTCAGCTTTTCATTTCCAACACCAACTGCCGGTTCAGAACTGTAGGAGAAGAGTTTACCAGAAGTGGGTGGGGATTTGCATTTCAGAGGGACTCTCCCCTTGCTGTTGACTTGTCAACCGCCATTCTCCAACTGTCTGAGAGTGGTGACCTGCAAAAGATCCATGATAAATGGCTGACGAGAAATGAGTGTACACAAATCAATGACGTTGATTCGAACCAGCTATCTCTCGAGAGCTTCTGGGGGCTTTTCCTTGTATGCGGAATAGCTTGTCTCCTGGCTTTGATAGCCTTCTTTATTCGGGTGTGTTGTCAATATATGAAATTCATCCCAGAGGAGGAGGACGGGGAAATCCCACCAACCAGGGTTAGAAGAAAATTCGGAACTGTTAGTAGCTTCAAGGACATCATGAATTTTGTAGATAAAAAAGAAGCAGATATGAAGGAGAAGATTCATAGGCAGAAGAAGAAACACAGAGGAAGCAGCTTAGGTGAGCCATCCAGTTCACCCACAACATTCCGAACTGCTAGCAGCTCCGAGGACATCATCGTTTCTGTAGATAAAAGAAAAGAAGGTATCAAGGAGAAGATTCTTAGGCAGAAGAGGAAACGCAGAGGTAGCAGCTAAGATGAGTAATCCAGTTCACCCACCATATAAGTATACATTTCTGTTGCTGCCTTCTGAACTCGTCAATTCATTTTGGCTGCCATATACTATCACCACACATTACACAGGTACACAAGGTATAAAATAGCAAATAGGTTATTTTTCACCCGAATTTCTTTTATAGAGAAAAAAAAAAATTTGTATCTAGTTGTAAATTTGTTAAAATTCCCGGGATACCCTACTGATTTGAAACAGAAACGAG 3217 0.424 MMILSELQVFEAFLAMEFLLITRNGRKVIISKLFLAVFCLWIPTQVVGRTGNATVNATVPSRPSVVRVGALFTINSVIGRSAKPAILAAVDDVNADKSILPNTKLEVILHDTNCSGFLGTVEALQLMEDEVIAAIGPQSSGIAHVISHVVNELHVPLLSFGATDPTLSALQYPYFLRTTQNDYFQMYGIVDFVDYYGWREVIAIFVDDDNGRNGISVLGDALAKKRAKISYKAAFSPGVNTSEITELLAGVNEMESRVYVVHVNPDTGLRIFSVAKKLGMVTAGYVWIATDWLPSLLDSSDQRANPDIMNLIQGVVAFRHHIPDTDLKKSFVSRMNNVKDKETASFNSYAFYAYDSVWLVARAFDVFLNNGGNLSFSNDPRLHDTNGSSLHLSSLRAFEGGPQFLQTILAMNFTGVSGQIQFNMDKNLIRPAYDILNIDGTGMRSIGYWSNHSGLSVEVPEILYQKPPNASTSNQKLLSVLWPGGTTTKPKGWVFPFNGKPLRIAVPNRVGYQEFVARDKHSGVKGYCIDVFEAAIKLLPYAVPLQYILYGNGDRNPDYTDLVNQVAQNNFDAAVGDVTIVTNRTRIVDFTQPYLESGLVVVVPVEEVKSSPWSFLKPFTAQMWCVTGAFFLFVGAVIWVLEHRTNHEFRGPPRKQLITIFWFSFSTMFFSHRETTVSSLGRLVLILWLFVVLIINSSYTASLTSILTVQQLTSQIEGIDSLISSSQPIGVQDGSFAKKYLTNELNIAESRIVTLKNQQDYIDALQRGPKGGGVVAIVDELPYIQLFISNTNCRFRTVGEEFTRSGWGFAFQRDSPLAVDLSTAILQLSESGDLQKIHDKWLTRNECTQINDVDSNQLSLESFWGLFLVCGIACLLALIAFFIRVCCQYMKFIPEEEDGEIPPTRVRRKFGTVSSFKDIMNFVDKKEADMKEKIHRQKKKHRGSSLGEPSSSPTTFRTASSSEDIIVSVDKRKEGIKEKILRQKRKRRGSS 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00407 991 FunFam Glutamate receptor 612 742 - -
Bach9g00407 991 SUPERFAMILY Periplasmic binding protein-like I 61 494 IPR028082 -
Bach9g00407 991 FunFam Glutamate receptor 497 612 - -
Bach9g00407 991 Gene3D - 181 455 - -
Bach9g00407 991 MobiDBLite consensus disorder prediction 946 960 - -
Bach9g00407 991 FunFam Glutamate receptor 181 348 - -
Bach9g00407 991 Pfam Ligand-gated ion channel 844 874 IPR001320 GO:0015276|GO:0016020
Bach9g00407 991 Pfam Receptor family ligand binding region 83 440 IPR001828 -
Bach9g00407 991 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 79 95 - -
Bach9g00407 991 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 139 167 - -
Bach9g00407 991 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 353 365 - -
Bach9g00407 991 SMART GluR_14 503 844 IPR001320 GO:0015276|GO:0016020
Bach9g00407 991 CDD PBP1_GABAb_receptor_plant 67 457 IPR044440 -
Bach9g00407 991 Gene3D - 496 611 - -
Bach9g00407 991 PIRSF IGluLR_plant 27 969 IPR017103 -
Bach9g00407 991 Pfam Bacterial extracellular solute-binding proteins, family 3 511 843 IPR001638 -
Bach9g00407 991 Gene3D - 85 430 - -
Bach9g00407 991 Gene3D - 612 736 - -
Bach9g00407 991 MobiDBLite consensus disorder prediction 930 960 - -
Bach9g00407 991 CDD GluR_Plant 500 842 - -
Bach9g00407 991 FunFam Glutamate receptor 738 846 - -
Bach9g00407 991 Gene3D - 737 846 - -
Bach9g00407 991 Coils Coil 738 758 - -
Bach9g00407 991 SUPERFAMILY Periplasmic binding protein-like II 477 844 - -
Bach9g00407 991 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 66 930 IPR015683 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00407 Bach-Chr9 2932100 2936200 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00407 62 809 Ion Channels AT1G05200 68.892 0.0 1113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00407 K05387 - qsa:O6P43_028681 1431