Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00402 CAACGGCCAAGGCCAAGCCAACCAATAACAACGCGATATTACTGTTTTAATGATGAACGACCTCCTTACGGATTCCTTTGTTGGTGAGGCTAAAGGTCAGCCTTCTAGACAAAATGATATTGAGATGGGAATTCAGGTTCCAAGGGGCAATCCTGATATGGGAATGGAAGCTTTTAACAAGCAGATTCAAGAAGCTGAAAAACAGGTTGATAAGCTGTCTGAGCTACTTAGAAAACTAAAGGTTGCTAATGAGGAGTCCAAATCTGTTACAAAAGCATCTGCCATGAAAGCTATCAAGAAGAGGATGGAGAAAGATATTGATGAAGTTGGAAAGATTGCACGTAATGTCAAAGCAAAAATTGAGGCTATAAACAAAGACAACCTAGCCAATAGACAAAAGCCTGGTTGTGCGAAGGGAACTGGTATTGACAGAGCAAGAATGAATATGACAAATTCCCTGACAAAAAGGTTCAAGGATCTAATGACAGAGTTTCAGACTCTTAGACAAAGAATACAAGATGAATATCGTGAGGTTGTGGAAAGAAGAGTTATTACAGTAACGGGAAGTAGGCCAGATGATGAGACAATTGACAACCTGATAGAAACTGGAAAGAGTGAGCAAATCTTTGAGAAGGCGATTCAAGAAATGGGCCGAGGACAGGTTGTAAACACACTGGAAGAAATTCAAGAGAGACACGATGCAGTCAAAGAAATTGAAAAGAAGCTTCTTGATTTACATCAGGCATACTTCCCAGAGATATTTATTTACATAGACATGGCTGTCTTAGTTGATGCTCAAGGAGAAATTTTGGATAACATTGAAAGCCAGGTCAACAATGCAGTTGATCATGTCCAGAGAGGGACAAATGCACTTCAAACTGCAAAGAAATATCAGAAGAGTTCCCGAAAATGGATGTGCATTGCCATCATTATTCTTTTGCTAATAGTAGCTGTAGTAGTTGTTGGTGTTCTTCGTCCTTGGAAGAATAGCTAG 994 0.3974 MNDLLTDSFVGEAKGQPSRQNDIEMGIQVPRGNPDMGMEAFNKQIQEAEKQVDKLSELLRKLKVANEESKSVTKASAMKAIKKRMEKDIDEVGKIARNVKAKIEAINKDNLANRQKPGCAKGTGIDRARMNMTNSLTKRFKDLMTEFQTLRQRIQDEYREVVERRVITVTGSRPDDETIDNLIETGKSEQIFEKAIQEMGRGQVVNTLEEIQERHDAVKEIEKKLLDLHQAYFPEIFIYIDMAVLVDAQGEILDNIESQVNNAVDHVQRGTNALQTAKKYQKSSRKWMCIAIIILLLIVAVVVVGVLRPWKNS 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00402 313 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 238 277 IPR000727 -
Bach9g00402 313 CDD SNARE_syntaxin1-like 207 276 - -
Bach9g00402 313 Gene3D - 34 162 - -
Bach9g00402 313 PANTHER SYNTAXIN 38 295 IPR045242 -
Bach9g00402 313 SMART SynN_4 33 159 IPR006011 GO:0016020
Bach9g00402 313 FunFam Syntaxin 132 33 162 - -
Bach9g00402 313 MobiDBLite consensus disorder prediction 1 21 - -
Bach9g00402 313 Pfam Syntaxin 41 250 IPR006011 GO:0016020
Bach9g00402 313 Pfam SNARE domain 251 303 IPR000727 -
Bach9g00402 313 FunFam Syntaxin 132 201 308 - -
Bach9g00402 313 SMART tSNARE_6 203 277 IPR000727 -
Bach9g00402 313 SUPERFAMILY t-snare proteins 35 270 IPR010989 GO:0016020|GO:0016192
Bach9g00402 313 CDD SynN 38 195 IPR006011 GO:0016020
Bach9g00402 313 Coils Coil 38 75 - -
Bach9g00402 313 Gene3D - 198 307 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00402 Bach-Chr9 2896073 2899364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00402 1 310 SNARE and Associated Proteins AT3G03800 60.645 1.65e-124 357
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00402 K08486 - qsa:O6P43_000588 488.034