Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00391 ATGGAGCTTCGTTCTCGTAGACGGATATCTGGTCCCGAAATCGATGCAGGAAGCGAGCGTCAGGATAGGGATGCCTTTAGGGAAGCTGATTCTAATAGCCAGTCCAGCAATAGTGCAGATGAAGATGTTTATGTGCCATCTTCTGATTCAGGTTCAGATCATGAAGATGGAAATGTTTGCAGGAACTTCCGTTTTGACCTAAATCAAGAACCAACTTCTAGCATTGGTATTTCCGATGGAGATAATTTCTCTGCTGATTCATCTGATGCTGTGGAGATTTCCCCTAAAAAGAGGGTGCAGTCCAGAAAGAAAGATAAAATCAGAGAACAGAGTCAGGAAGGGAGAGGTGAGTATCATGGGCAAGACCAGCAGCAGCCAGTTGATCTTCTTCCGGTTAGACTGAAAAACAAGAAAAAGGAAAAGAAAAAGAAAAAGAGGAAAGAGGAATCACGGCCTGTGTTGTTGTGGCATATCTGGGAAGATGAGCAAGAAGATTGGATTGATAGGAATTTATCGCAAGATGTTGAATTAGATAACCAGAATGAACTCATGAATGAAACTGCTGAACCATCCTCTGATCTGACCATGCCTTTGCTAAGATACCAAAAGGAATGGTTAGCCTGGGCTTTGAAACAGGAAAATTCTGAGATTCGAGGGGGAATCCTTGCTGATGAAATGGGAATGGGTAAGACCATTCAAGCAATTTCCCTTGTTCTTGCTCAACGTGAATTCCAGAGATTGATTTGTGAACCAGATAAACCCTCACCTTCACAAGGTTCATCTACAGTCTTGCCTGCAATCAAAGGAACACTTGTAGTTTGTCCTGTGGTTGCTGTCTCCCAATGGGTAAACGAGATTGGTAGATTCACCTCTAAAGAAAGCACCAAGGTCCTGGTTTATCATGGGGCCAGGAGAGGGAAGAGTGGTGAACAATTCGGAAATTATGATTTTGTAGTAACTACCTACTCAATTGTTGAGTCTGAGTACAGGAAGTACCTCATGCCTCCTAAGCATAAGTGCCCTTATTGTGGCAAATTATTCTACCAGAATAAATTATCTACCCACTGGAAATATTTTTGTGGGCCTTTTGCTGAGAGAACAGAAAAACAATCAAAGCAAGTTAAGAAAAGGAAAAGAGATATTACTAAACAGAAGCTCAATGACCTTGAGAAAGGGAAAGATAGGGGAGCTCACAAGCAGAAGTTGACGCTTTGGAGTGACGGAGAACTGGATTTGGACTTGAAAATAGAAAATTCAGATGCTACACAGAGGGAGAAATCGCTTTTACATGCTGTAAAGTGGCAGCGGATCATCTTGGATGAGGCACACTATATTAAATCTAGACACTGTAATACTGCAAAAGCAGTTCTTGCTCTGGAGTCTTCATACAGATGGGCATTAAGTGGCACTCCCCTTCAGAACCGTGTTGGGGAGCTGTATTCCCTAGTACGGTTCCTGCAGATAGTTCCTTATTCCTATTACTTGTGCAAGGACTGTGATTGTAGGATTCTTGATCATAGTTCTTCTAAAGATTGTCCTAACTGCCCCCACAGTTCTGTCAGACATTTTTGTTGGTGGAATAGATATGTTGCCACACCAATACAATCATATGGGTATGGTGATAGTGGAAAAAGAGCTATGATATTGCTGAAGCACAAAGTTTTGAAGAACATAATCCTAAGGCGAACTAAATTAGGCAGAGCTTCTGACCTGGCACTTCCACCTAGAATTGTTTCATTGAGGAGGGACAGTCTAGATATAAAAGAGCAAGACTATTATGAATCATTATACAATGAAAGTCAGACACAGTTTAATACGTATGTTGAAGCAAATACTCTGATGAATAATTATGCTCATATATTTGACCTCCTCACACGGCTCCGACAGGCTGTTGATCACCCATACCTCGTGGAATATTCTCAAGCTGCAGCATTGAGAGGTAGAAGTGTGGTTAATAGTTCTAATGGTGAACGAGCATGCGGTCTTTGTCATGACCCAGTGGAAGACCCTGTGGTTACCTCTTGTGAGCATATATTTTGCAAGGCATGCTTAATAGATTTCTCCGCTTCCTTGGGATGTGTATCATGCCCTTCATGCTCTAAATTACTTACTGTTGATTTAACTTCAAAAAATGATCCTGGGGCTAGTAAAACAACAATTAAGGGTTTCCGATCCTCAAGCATTTTAAACAGAATTCTTCTTGAGAACTTCCAGACAAGCACTAAAATAGAAGCTTTGAGAGAAGAAATTAGACTAATGGTTGAAAGGGATGGTTCTGCAAAAGGAATTGTTTTTAGCCAGTTCACTTCATTCTTGGATCTCATAAACTACTCCCTCCACAAGTCTGGTGTATCTTGCGTTCAATTAAATGGAAGCATGACATTGGCTGCCAGGGATGCTGCCATCAAGAGATTCACTGATGATCCAGACTGCAGAATTTTTCTCATGAGCTTGAAGGCTGGCGGTATCGCTCTCAATTTGACGTCAGCGTCACACGTTTTTCTTATGGACCCTTGGTGGAACCCAGCTGTGGAGCGTCAGGCTCAAGACAGGATTCACCGAATAGGGCAATATAAACCAATCAGAATTGTGAGGTTTATCATTGAGAACACAATAGAGGAGAGGATTTTGAAGCTGCAAGAGAAGAAGGAACTAGTGTTTGAAGGGACTGTCGGCGGATCTTCTGAGGCTCTGGGGAAATTGACAGAGGAAGACTTGAAATTTCTATTTGTCACCTAAGCAGGACTCTAGTTTTAATAGCCAAAGTACTTGCTGCTTACTGTCATTTAGATTTTGTTTTGAAATATTTCTGTTTATGCCATGTAACCGTAACAAATATTTCTGTTTACGCCATGTAGCCGTTCGATATCTATGGCATAGAGCAAATACATTTGTTGTAAATACCAGTGGGTTGGGTCTTTGATTTTATCCGACCTGTCCGATTGGGTGAAATACCAAATTGTATTTTTTCAGTGAACTTGAAA 2984 0.4129 MELRSRRRISGPEIDAGSERQDRDAFREADSNSQSSNSADEDVYVPSSDSGSDHEDGNVCRNFRFDLNQEPTSSIGISDGDNFSADSSDAVEISPKKRVQSRKKDKIREQSQEGRGEYHGQDQQQPVDLLPVRLKNKKKEKKKKKRKEESRPVLLWHIWEDEQEDWIDRNLSQDVELDNQNELMNETAEPSSDLTMPLLRYQKEWLAWALKQENSEIRGGILADEMGMGKTIQAISLVLAQREFQRLICEPDKPSPSQGSSTVLPAIKGTLVVCPVVAVSQWVNEIGRFTSKESTKVLVYHGARRGKSGEQFGNYDFVVTTYSIVESEYRKYLMPPKHKCPYCGKLFYQNKLSTHWKYFCGPFAERTEKQSKQVKKRKRDITKQKLNDLEKGKDRGAHKQKLTLWSDGELDLDLKIENSDATQREKSLLHAVKWQRIILDEAHYIKSRHCNTAKAVLALESSYRWALSGTPLQNRVGELYSLVRFLQIVPYSYYLCKDCDCRILDHSSSKDCPNCPHSSVRHFCWWNRYVATPIQSYGYGDSGKRAMILLKHKVLKNIILRRTKLGRASDLALPPRIVSLRRDSLDIKEQDYYESLYNESQTQFNTYVEANTLMNNYAHIFDLLTRLRQAVDHPYLVEYSQAAALRGRSVVNSSNGERACGLCHDPVEDPVVTSCEHIFCKACLIDFSASLGCVSCPSCSKLLTVDLTSKNDPGASKTTIKGFRSSSILNRILLENFQTSTKIEALREEIRLMVERDGSAKGIVFSQFTSFLDLINYSLHKSGVSCVQLNGSMTLAARDAAIKRFTDDPDCRIFLMSLKAGGIALNLTSASHVFLMDPWWNPAVERQAQDRIHRIGQYKPIRIVRFIIENTIEERILKLQEKKELVFEGTVGGSSEALGKLTEEDLKFLFVT 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00391 912 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 738 902 IPR001650 -
Bach9g00391 912 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 211 489 IPR014001 -
Bach9g00391 912 SUPERFAMILY RING/U-box 649 704 - -
Bach9g00391 912 CDD DEXDc_SHPRH-like 198 504 - -
Bach9g00391 912 ProSitePatterns Zinc finger RING-type signature. 675 684 IPR017907 -
Bach9g00391 912 Pfam Helicase conserved C-terminal domain 742 856 IPR001650 -
Bach9g00391 912 MobiDBLite consensus disorder prediction 91 116 - -
Bach9g00391 912 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 562 IPR027417 -
Bach9g00391 912 CDD SF2_C_SNF 740 867 - -
Bach9g00391 912 SMART ultradead3 194 494 IPR014001 -
Bach9g00391 912 MobiDBLite consensus disorder prediction 1 29 - -
Bach9g00391 912 Gene3D - 578 911 IPR027417 -
Bach9g00391 912 ProSiteProfiles Zinc finger RING-type profile. 660 700 IPR001841 -
Bach9g00391 912 SMART helicmild6 773 856 IPR001650 -
Bach9g00391 912 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 433 910 IPR027417 -
Bach9g00391 912 PANTHER TRANSCRIPTION TERMINATION FACTOR 2-RELATED 40 910 - -
Bach9g00391 912 Pfam SNF2-related domain 212 637 IPR000330 GO:0005524|GO:0140658
Bach9g00391 912 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 654 729 IPR013083 -
Bach9g00391 912 SMART ring_2 660 699 IPR001841 -
Bach9g00391 912 MobiDBLite consensus disorder prediction 30 45 - -
Bach9g00391 912 MobiDBLite consensus disorder prediction 1 146 - -
Bach9g00391 912 MobiDBLite consensus disorder prediction 65 89 - -
Bach9g00391 912 Gene3D - 167 341 IPR038718 -
Bach9g00391 912 Gene3D - 351 577 IPR038718 -
Bach9g00391 912 Coils Coil 364 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00391 Bach-Chr9 2810204 2816776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00391 122 912 RAD5 or RAD16-like Gene Family AT1G05120 67.970 0.0 1104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Bach9g00391 SNF2_N 7.2e-50 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00391 K15083 - qsa:O6P43_028664 1289.63