Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00387 ATGGACTGGACTAGAGGCCACATGATCGGCTATGGCTCATCAGCCACCGTCTCTCTCGCCGCCTCTTGCCACTCCTCTGACGTCTTCGCCGTCAAGTCAGCGGAGCTACCCCGGTCGGAGTTGTTGCAGAGAGAGGAGAAATTTCTATCTTCTTTATGCTCTCCTCACATAGTCAGCTACAAAGGGTTCGATATTAGCAGGGAGAACAACAAGATCTTGTACAATCTTTTCATGGAGTATATGCCACTTGGCACGCTTAGTCAATCAGTTCACCGGCACGGTGGCCGGCTCGAGGAGCCAGCGATCGCGTGCTATACGCGGCAAGTTTTGCAGGGACTAGACTATTTACATTCAATTGGGTTGGTACATTGTGACATTAAAGGTACCAATATCTTGATCAGTGAAGAGGGTGCCAAAATTGCTGACTTTGGATGTGCTAAGCGGGTCAATGATGCTGCGGCAGAGCAAATTAGCGGCACCCCCATGTTTATGGCTCCAGAGGTGGCGCGTGGGGAAGAGCAGGGGTGTCCTTGTGATATATGGGCACTTGGGTGCACCGTAATTGAAATGGTTACAGGGGTTTCACCTTGGCCTAATGTGGTAGACCCTGTTTCGGTTCTTTACCGAATTGCATATTCCGGTGAAACGCCAGAGATTCCAGGAATTCTATCAGAGCAAGCAAAGGATTTCTTGGGCAAATGTTTAAAGAGGAATCCCAAAGATAGGTGGACGGCTATTCAATTGCTTAAGCATCCATTTCTTGAGGAATTCAATTCTATTGGTGCTAAGGAAATTCAAGAATCTAATCCAACTTCATCCCCAACAAGTATTCTTGAGCAAGGCTTTTGGAGTTGTTTAGAGGAATCAGAGAGTTTTGGTAATTTGACTCGTTCAAGTTTTGAAAATTCCCCTGCTGACAGAATCAGACGGCTAGCAGCGTGTTCAGGGGAACCCGGTTGGAGATGGGACGAGGATTGGATGATAACTAGAGGGAATGAAGCAGAAGCTGCATTTGAAGCTGGTGCGATTTCTGGGTCACAGACAGCTTCAGCTTCAACTTCAAGTTCAACCACTGACTCTACGCAAGAGTCAGAGAAAAGCAATATCAAAACAATTAGTGCTAGTGGGTGTTTTAGTTATTTTTGTGATGATAACAATAATAGGGAACTTAGTGTTGTGATTAGTGGTTTCGATTCTGGGAGAAGCTTTGATCAGCTGCTCCCTTCAGTATCAATTTTCTTATAA 1245 0.4586 MDWTRGHMIGYGSSATVSLAASCHSSDVFAVKSAELPRSELLQREEKFLSSLCSPHIVSYKGFDISRENNKILYNLFMEYMPLGTLSQSVHRHGGRLEEPAIACYTRQVLQGLDYLHSIGLVHCDIKGTNILISEEGAKIADFGCAKRVNDAAAEQISGTPMFMAPEVARGEEQGCPCDIWALGCTVIEMVTGVSPWPNVVDPVSVLYRIAYSGETPEIPGILSEQAKDFLGKCLKRNPKDRWTAIQLLKHPFLEEFNSIGAKEIQESNPTSSPTSILEQGFWSCLEESESFGNLTRSSFENSPADRIRRLAACSGEPGWRWDEDWMITRGNEAEAAFEAGAISGSQTASASTSSSTTDSTQESEKSNIKTISASGCFSYFCDDNNNRELSVVISGFDSGRSFDQLLPSVSIFL 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00387 414 ProSitePatterns Protein kinases ATP-binding region signature. 9 32 IPR017441 GO:0005524
Bach9g00387 414 FunFam Mitogen-activated protein kinase kinase kinase 17 2 307 - -
Bach9g00387 414 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 317 - -
Bach9g00387 414 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Bach9g00387 414 Gene3D Transferase(Phosphotransferase) domain 1 2 309 - -
Bach9g00387 414 CDD STKc_MAPKKK 2 254 - -
Bach9g00387 414 SMART serkin_6 3 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach9g00387 414 ProSiteProfiles Protein kinase domain profile. 3 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach9g00387 414 Pfam Protein kinase domain 5 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bach9g00387 414 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Bach9g00387 414 SUPERFAMILY Protein kinase-like (PK-like) 2 287 IPR011009 -
Bach9g00387 414 MobiDBLite consensus disorder prediction 343 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00387 Bach-Chr9 2800738 2801982 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00387 1 347 MAP Kinase Kinase Kinase AT2G32510 50.549 4.18e-116 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bach9g00387 Pkinase 2.1e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00387 K20716 - qsa:O6P43_028662 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01089 13 15514762 15515976 Bach9g00387 9 2800738 2801982 BWGD
Bach9g00387 9 2800738 2801982 Bach7g01220 7 22633884 22635170 ECH
Bach9g00387 9 2800738 2801982 Bach9g00387 9 2800738 2801982 ECH