Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00360 ATGGACGAAATTGAAGTTCCTCCCCATTTTCTCTGCCCCATTTCCCTACAGCTTATGAGAGACCCAGTTACAGTCTCCACAGGAATCACTTATGATAGAGAAAATATAGAGAGATGGTTGTTTTCATGTAAGAACAACAGTTGCCCTGTCACTAAGCAATCACTGCCAGACCCAGATCTTACCCCAAACCACGTTCTGCGCCGTTTGATCCAAGCATGGTGCACCCTTAATGCCTCCCATGGCATTGAACGCATTCCAACTCCAAAGCCACCCGTTGACAAAACCCATATTATTAGAATCCTCTCTGAAGCAAAAAGGTTTCCGGATAAGCAGCTGAAATGCCTTAGAGAGCTTCGATCTACTGTTTTCGAAAGCGAAAGGAACAAGACCTGTTTGGAGTCAGCAGGAGCAGTAGAATTCTTGGCTTCATCTTTGAAGAACAGTGAGGAAGACTCAACTTTGCAGAGTGAAGCAGAAGCTGCTATTGAAGTCTTATTTCATCTAAATCCTTCTGAAGTTCGTCTTAAAAATCTAATGAACAACGAGGGCATTCAATTTGTTGAGTCTTCTATACAAATCTTGAAGCTTGGAAACTATCAATCTCGAGCATATGCAACCATGTTATTGAAGTCAGCGTTTCAAGTAGCTGATCCCATCCAATTGATCAGTGTCAGAGCAGAACTGTTTGTGGAAATAACGAGAGTGCTACGAGATAAGATTTCACATCAGGCTTCAAAGGCTGCATTGAAGCTTCTAATGGAGCTCTGTCCGTGGGGCAGAAACCGAATCAAAGCCGTTGAAGGCGATGCCGTTATGACGCTGATAGAACTCCTTCTGGATTCCTCAGAAAGAAGAGCATGTGAGCTCATGCTAATTGCTATGGATCAACTTTGTGGTTGTGCAGAAGGGAGGGCAGAGTTGTTGAGGCATGGAGCAGGAGTGGCCATAGTGTCCAAGAAAATTCTAAGGGTTTCTCATGTGGCAACTGATAGAGCGGTTAGAATATTGACCTCCATTTGTAGGTATTCAGCCACTACTAGAGTGCTTCAAGAGATGTTACAAGTTGGGGCTGTGTCCAAATTGTGTTTGGTGCTTCAGGTGGATGGAAATTTGAAGACAAAGGAGAGAGCCATGGAGACGCTCAAATTGCATTCTAGAGCATGGAAGAATTCTCCATGTATTCCTCTTCCTTTGCTCTCTTCCTATCCATCTAATTAA 1218 0.436 MDEIEVPPHFLCPISLQLMRDPVTVSTGITYDRENIERWLFSCKNNSCPVTKQSLPDPDLTPNHVLRRLIQAWCTLNASHGIERIPTPKPPVDKTHIIRILSEAKRFPDKQLKCLRELRSTVFESERNKTCLESAGAVEFLASSLKNSEEDSTLQSEAEAAIEVLFHLNPSEVRLKNLMNNEGIQFVESSIQILKLGNYQSRAYATMLLKSAFQVADPIQLISVRAELFVEITRVLRDKISHQASKAALKLLMELCPWGRNRIKAVEGDAVMTLIELLLDSSERRACELMLIAMDQLCGCAEGRAELLRHGAGVAIVSKKILRVSHVATDRAVRILTSICRYSATTRVLQEMLQVGAVSKLCLVLQVDGNLKTKERAMETLKLHSRAWKNSPCIPLPLLSSYPSN 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00360 405 ProSiteProfiles U-box domain profile. 5 80 IPR003613 GO:0004842|GO:0016567
Bach9g00360 405 CDD RING-Ubox_PUB 7 60 IPR045210 -
Bach9g00360 405 SUPERFAMILY ARM repeat 108 382 IPR016024 -
Bach9g00360 405 FunFam RING-type E3 ubiquitin transferase 1 83 - -
Bach9g00360 405 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 84 IPR013083 -
Bach9g00360 405 PANTHER WDSAM1 PROTEIN 3 395 IPR045185 GO:0061630
Bach9g00360 405 Pfam U-box domain 6 75 IPR003613 GO:0004842|GO:0016567
Bach9g00360 405 Gene3D - 86 391 IPR011989 -
Bach9g00360 405 SUPERFAMILY RING/U-box 3 80 - -
Bach9g00360 405 SMART Ubox_2 9 73 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00360 Bach-Chr9 2605523 2606740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00360 2 403 U-box Gene Family AT2G35930 54.433 3.00e-162 460
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00360 - - gmx:100778012 624.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01119 13 15726078 15727301 Bach9g00360 9 2605523 2606740 BWGD