Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00350 ATGTCGGGTACGCGAGCTCCGACTACCTCGTCTCAGCCGCCCGACCAGATCATGCACTCTATGAAACGCCAACTCCCATTTTCATCGATGAAGCCGCCCTTTGTAGCTCCGGGAGATTATCATCGTTTCACGCCTGACCATCGGCGAGCTGCTGAGCGAGAAGCCGAGGCCATCGTTGTTAAGTCCCCCCAATTGAAGCGGAAGAGTGACACAGCCGATAATGAAGCAGATTCTGGTGATAGGATGGCTCCTAGATCCACTGAAGCAGCTAATAGTCCCTTTCAGACACCTACATCAGGAAAGACGGGGAAGGGTGGGAGGGGCTCAAGAATTACAAAAGGCAGCAGATCTGGACCTCAAACCCCAGGTTCCAATATAGGTTCTCCTTCCGTCAATAATCTCACTCCAGCTGGTCCATGCCGTTATGACAGCTCTTTAGGTTTGTTGACGAAGAAGTTCATCAATTTAATCAAACAAGCGGAGGATGGTATTCTTGACCTGAATAAAGCAGCTGACACATTGGAGGTCCAAAAGAGGAGGATATATGACATAACAAATGTTCTCGAAGGGATTGGTCTTATAGAAAAGAAGCTCAAAAACAGAATTCAATGGAAGGGACTGGATGTTTCAAGGCCAGGGGAAGCTGATGATAATTTTGCTAGTTTACAGGCAGAAGTTGAAAATCTAACCATAGAGGAGCGCCGATTAGATGAACAAATAAGGGAGATGCAAGAAAGACTAAGGGACCTTAGTGAAGATGAAAACAATCAGAAGTGGCTTTTTGTCACGGAGGAAGATATTAAAGCTTTGCCCTGCTTCCAGAACGAAACATTAATTGCAATTAAAGCTCCTCACGGTACAACTCTGGAAGTCCCTGATCCTGATGAGGCCGTTGATTATCCCCAGAGGAGATATAGGATTGTCCTGAGAAGCACAATGGGCCCAATAGATGTTTACCTTGTTAGTCAATTTGAAGAAAAGTTTGAGGAGATTAATGGTGTTGAAGCAGCACCCGCGCCCGCACCCAGTCATCCTTCCACTCCAGAGTATGACAAACATCCAGCAACAGTGGTTACGGAGGTAAGAGGGAAGAACATAGAAGAGCAGGGACAAGACAGTCATACAGCTTATTCAGATCTTACTGCCTCTCAGGACTTCGTGACTGGGATCATGAAGATTGTTCCTTCAGATGTTGATAGCGATGCTGATTACTGGCTTTTATCTGATGCTGATGTTAGCATTACAGACATGTGGAGAACAGAACCTGGAGTTGAATGGAGTGAATTGGGCACAATTCATGAAGATTATAGCATGAACAATGTAAGCACACCGCGAGCCCAAACTCCTCCTTCTAACACAAGTGAAGTGCCTTCGGCAGCTAACCCCACTGTAGGCTGACGCTTCAAGAGAGTATATTGTGAATCTAATCAAGGGCTAGTGGGTTGTTTCTGTTTCCCATTAAGCACGTATGACATCCGGCCTTCCCCCTTTCGTTCCTCTCCAACATAGCTGGTCGGATTGAAGGTTCCATGAACATGCTTTTTCGATATTTTGTTAAGGAGCTCGTCTAAGGAAAACTAGAATAGCGAATGAGGAAAGCTTGCTCATTGTACAGTTATAATACAGAATCCGAGCGATGTTCTGGGGAAAAGGAGTATACAGTCTAGCAGCTTTGCTAAATCCACCCTTGTATATTATTGTAATTCTTAGCCTTAGAGTTCTTAGCTCTTTGTCTCCATCAGATATGTTTGAAAAGCAATAAAGCAAAGCACCCCTCGAACATAGATTGAGC 1792 0.4509 MSGTRAPTTSSQPPDQIMHSMKRQLPFSSMKPPFVAPGDYHRFTPDHRRAAEREAEAIVVKSPQLKRKSDTADNEADSGDRMAPRSTEAANSPFQTPTSGKTGKGGRGSRITKGSRSGPQTPGSNIGSPSVNNLTPAGPCRYDSSLGLLTKKFINLIKQAEDGILDLNKAADTLEVQKRRIYDITNVLEGIGLIEKKLKNRIQWKGLDVSRPGEADDNFASLQAEVENLTIEERRLDEQIREMQERLRDLSEDENNQKWLFVTEEDIKALPCFQNETLIAIKAPHGTTLEVPDPDEAVDYPQRRYRIVLRSTMGPIDVYLVSQFEEKFEEINGVEAAPAPAPSHPSTPEYDKHPATVVTEVRGKNIEEQGQDSHTAYSDLTASQDFVTGIMKIVPSDVDSDADYWLLSDADVSITDMWRTEPGVEWSELGTIHEDYSMNNVSTPRAQTPPSNTSEVPSAANPTVG 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00350 465 CDD E2F_DD 217 323 IPR032198 GO:0046983
Bach9g00350 465 FunFam E2F transcription factor 1 135 208 - -
Bach9g00350 465 Gene3D - 135 208 IPR036388 -
Bach9g00350 465 Pfam E2F transcription factor CC-MB domain 222 322 IPR032198 GO:0046983
Bach9g00350 465 PANTHER TRANSCRIPTION FACTOR E2F 78 424 IPR015633 GO:0000978|GO:0006357
Bach9g00350 465 SUPERFAMILY "Winged helix" DNA-binding domain 141 204 IPR036390 -
Bach9g00350 465 MobiDBLite consensus disorder prediction 41 82 - -
Bach9g00350 465 Coils Coil 219 256 - -
Bach9g00350 465 SUPERFAMILY E2F-DP heterodimerization region 219 323 IPR037241 -
Bach9g00350 465 MobiDBLite consensus disorder prediction 113 134 - -
Bach9g00350 465 Gene3D - 213 323 - -
Bach9g00350 465 Pfam E2F/DP family winged-helix DNA-binding domain 143 206 IPR003316 GO:0005667|GO:0006355
Bach9g00350 465 SMART E2F_TDP_2 141 206 IPR003316 GO:0005667|GO:0006355
Bach9g00350 465 MobiDBLite consensus disorder prediction 88 105 - -
Bach9g00350 465 MobiDBLite consensus disorder prediction 1 134 - -
Bach9g00350 465 MobiDBLite consensus disorder prediction 1 18 - -
Bach9g00350 465 Coils Coil 157 177 - -
Bach9g00350 465 MobiDBLite consensus disorder prediction 437 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00350 Bach-Chr9 2467869 2472317 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00350 16 465 E2F-DP Transcription Factor Family AT5G22220 56.576 3.09e-161 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF E2F-DP Bach9g00350 E2F_CC-MB 7.4e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00350 K06620 - gmx:100819817 699.893
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00350 9 2467869 2472317 Bach9g00350 9 2467869 2472317 ECH