Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00322 ATGCCACGGGGAAAGGCAAATTCTTCATCAGTTACTAAGCCAGATGAACCTGAAAAGCCAACTGAGTCAGAGAAGATTGATCTTGACGAAGCAAATGATCCTGAGGAAGTAATGGAAGAAGACATTGAATATGAAGAAGTAGAGGAGGAAGAGGAAGTGGAAGAGATAGAAGAGGAGGTGGAAGAGGAGGAGGATCCAGAGGAGGAAGAAGAGGCTGAGGAAGTGGAAGAAGATGATGCTAGTCATGCCCTGCAAAACATGAGCAGTGCAAAAGTGGAAGATGAGGATGAGAAGAAGAAACATGCGGAACTTTTTTCTCTTCCTCCTCATGGCTCTGAAGTATACATTGGTGGCATTCCTCATGATGCATCAACAGAAGATTTGAGGGCATTTTGTGAGCCTATTGGGGAAATTGTAGAGGTTCGAGTTATGAAAGGAAAAGATTCTGGTGAGAACAAGGGCTTTGGTTTTGTGACTTTTAGAAATGTGGAATTGGCCTCTAAAGCTATTGATGAACTGAATAATACCGAATTTAAGGGTAAAAAAGTAAAATGTTCAACTTCTCAAGCAAAACACCGTCTTTTCATTGGTAATGTTCCTAGAAATTGGGGTGAGGAAGATCTGAGGAAGGTTGTAACTGAGATTGGGCCTGGAATTACTGCTATAGAACTAGTCAAGGATATGAAGAACACAAACAATAACCGTGGCTTTGCTTTTATTGATTATTACAATCATGCATGTGCTGAGTATTCAAGGCAAAAGATGATGAACCCAAAATTTAAGCTTGGTGACAATGCTCCAACAGTGAGCTGGGCCGACCCTAAAAATGCTGATTCCTCTGCTGCATCACAGGTAAAGGCAGTCTATGTGAAGAACTTACCGAAGAATATAAGTCAAGACCAGTTAAAGAAGCTTTTTGAACACCACGGGAAGATCACAAAGGTGGTTCTGCCACCAGCAAAGTCTGGACAGGAAAAGAACAGGATCGGTTTTGTACATTTTGCAGAGAGATCGAGTGCTATGAAAGCACTAAAAAACACTGAAAGATATGAATTAGAAGGTCAAGTTTTGGAATGCTCTCTAGCCAAACCACAGGCTGATCAGAAGTCTGGAGGATCAAATACACAGAAATCAGGATTGCTTCCAAGCTATCCTTCCCGTGTTGGTTATGGTATGGTTGGAGGTGCATATGGTGCTTCAGGTCTTGCACAGCCCTTGATATATGGAAGGGGTCCGACTCCTACTGGGATGGCTATGATGCCCATGCTTCTGCCTGATGGACGGATTGGCTATGTCCTGCAACAACCAGGACTCCAGCCGCAAACCCCACCTTCGCATCAGAGGGGTGGCAGGAATGGTGGTGGGGGTGGTTCCAATAATCTTGGCAGTTCAAGCAAGGGAAGACATGGCAATGATGGTGGCCAAGGGCGCAGATACCGCCCATATTAGTTGTCCTTTTTGTAAATGAAAAAGGTTTTAGCATTCTCTTCCAATACCATCATTTAATTTATTGAAGCGTGTTAAACAATTGCTTTGTATTTAGAACTTATATTTTGATAGGTTTAGTC 1568 0.4279 MPRGKANSSSVTKPDEPEKPTESEKIDLDEANDPEEVMEEDIEYEEVEEEEEVEEIEEEVEEEEDPEEEEEAEEVEEDDASHALQNMSSAKVEDEDEKKKHAELFSLPPHGSEVYIGGIPHDASTEDLRAFCEPIGEIVEVRVMKGKDSGENKGFGFVTFRNVELASKAIDELNNTEFKGKKVKCSTSQAKHRLFIGNVPRNWGEEDLRKVVTEIGPGITAIELVKDMKNTNNNRGFAFIDYYNHACAEYSRQKMMNPKFKLGDNAPTVSWADPKNADSSAASQVKAVYVKNLPKNISQDQLKKLFEHHGKITKVVLPPAKSGQEKNRIGFVHFAERSSAMKALKNTERYELEGQVLECSLAKPQADQKSGGSNTQKSGLLPSYPSRVGYGMVGGAYGASGLAQPLIYGRGPTPTGMAMMPMLLPDGRIGYVLQQPGLQPQTPPSHQRGGRNGGGGGSNNLGSSSKGRHGNDGGQGRRYRPY 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00322 482 MobiDBLite consensus disorder prediction 28 78 - -
Bach9g00322 482 FunFam RNA recognition motif-containing protein 21 192 - -
Bach9g00322 482 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 286 364 IPR000504 GO:0003723
Bach9g00322 482 MobiDBLite consensus disorder prediction 1 81 - -
Bach9g00322 482 Gene3D - 33 192 IPR012677 -
Bach9g00322 482 CDD RRM_SF 114 186 - -
Bach9g00322 482 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 112 190 IPR000504 GO:0003723
Bach9g00322 482 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 192 274 IPR000504 GO:0003723
Bach9g00322 482 SMART rrm1_1 113 186 IPR000504 GO:0003723
Bach9g00322 482 SMART rrm1_1 193 270 IPR000504 GO:0003723
Bach9g00322 482 SMART rrm1_1 287 360 IPR000504 GO:0003723
Bach9g00322 482 MobiDBLite consensus disorder prediction 363 383 - -
Bach9g00322 482 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 275 384 - -
Bach9g00322 482 SUPERFAMILY RNA-binding domain, RBD 282 389 IPR035979 GO:0003676
Bach9g00322 482 Coils Coil 37 73 - -
Bach9g00322 482 SMART rrm2_1 113 186 IPR003954 GO:0003676
Bach9g00322 482 MobiDBLite consensus disorder prediction 435 470 - -
Bach9g00322 482 FunFam RNA-binding (RRM/RBD/RNP motifs) family protein 193 273 - -
Bach9g00322 482 SUPERFAMILY RNA-binding domain, RBD 109 278 IPR035979 GO:0003676
Bach9g00322 482 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 13 443 - -
Bach9g00322 482 MobiDBLite consensus disorder prediction 434 482 - -
Bach9g00322 482 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 288 357 IPR000504 GO:0003723
Bach9g00322 482 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 194 257 IPR000504 GO:0003723
Bach9g00322 482 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 114 184 IPR000504 GO:0003723
Bach9g00322 482 Gene3D - 193 273 IPR012677 -
Bach9g00322 482 MobiDBLite consensus disorder prediction 366 382 - -
Bach9g00322 482 Gene3D - 275 398 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00322 Bach-Chr9 2326125 2329328 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00322 119 440 Eukaryotic Initiation Factors Gene Family AT4G34110 26.197 9.31e-16 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00322 K13161 - qsa:O6P43_000471 704.131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00322 9 2326125 2329328 Bach9g00322 9 2326125 2329328 ECH