Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00308 GCCCTTTCTGAGGAGAGAATTTCACTAACTCTTCAACGAAATCTCTCTGAAGATGGGTTTGAGGGAATGCAATATTGTAGAAGACAAAAATATTTACTTTCATCCTCCAACTTTCATTGAATGGCTCAAGCCATCTACTTCTCCTTCTTCATCACTCTCCTCTTCTTTGTCATCATCTCCTTCTCTGGGTACTCAACATGATCAGCTTGTAAAAGAGACTATCCAGTTTATGCCCATTTTAAGTGGGTTCACTCCACAAGAGGAAGATCAAAAGGAGATTTTTGGAGTAAAAGAAGAGAAAATAGAGCAAGTCACTGTAGCTTTGCACATTGGATTACCTAACACAGAAGAAGATCTTCCGGAGGCTGATCATGAGAAAAAAGTTTTTGATGTTAAGGAAGTAGAGGCCGTGAAGAAAAGCTTCCATGGCTGCTCCTTTAACCCAGAAAGAAGGTTTTGGATCCCAACTCCTGCACAGATCCTTGTTGGGCCGATGCAGTTTGCGTGCTCCATATGCAGCAAGACCTTCAATAGGTATAACAACATGCAGATGCATATGTGGGGGCATGGGTCCGAATACAGAAAAGGACCAGACTCGCTTAGAGGAACACAACCTGCAGCAATGCTGAGGCTACCATGCTATTGTTGTGCACAAGGCTGCAAGAACAACATCAATCATCCAAGAGCAAAGCCACTTAAGGACTTCAGGACCCTCCAAACCCACTACAAAAGAAAGCATGGAGCAAAGCCCTTCATGTGCAGAAAATGTGGGAAAACATTTGCAGTCAAAGGAGATTGGAGGACCCATGAGAAGAACTGTGGCAAGTTATGGTACTGCACTTGTGGTTCAGATTTCAAACACAAAAGATCTCTCAAAGATCACATCAGATCCTTTGGAAAGGGTCACTCACCACATCCTTCACTTGAAGGTTTTGAAGATGAGAAGGAATGCATTACTACTGGGTCTGAAGATGAAGTTGGTCACACATGATCATCGATCTAACACAGCTTAATTTCCTTTATTATAATTAAAGAAATAGGAATTAAGTTTAATTAGTAGGCGTATATATCATTCTGCTTGTGCTCAGTAACAAAAAATTCTCAAAATTTGCTGAGGCATGCACAGAGGGAGCGGTTTGCTACCGAGCACAATTGCAGGGTGATGATCATGAGCTAGCTAGCTAGAAGCAAGATCATATTATAGAGGTTTGGACCAGTTTGAGTTGTGATTAATCAATAAAGAAGATTACCTCAAGTGATGAAGTAGATGAATTTTCTTTCTTATAGGAGAAAAGAGGTGATATTGTGTGATGAAGTTTTTGTAACATCTTCTATGGGGAAAATTTATCCGCTTCATTGC 1360 0.4081 MGLRECNIVEDKNIYFHPPTFIEWLKPSTSPSSSLSSSLSSSPSLGTQHDQLVKETIQFMPILSGFTPQEEDQKEIFGVKEEKIEQVTVALHIGLPNTEEDLPEADHEKKVFDVKEVEAVKKSFHGCSFNPERRFWIPTPAQILVGPMQFACSICSKTFNRYNNMQMHMWGHGSEYRKGPDSLRGTQPAAMLRLPCYCCAQGCKNNINHPRAKPLKDFRTLQTHYKRKHGAKPFMCRKCGKTFAVKGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIRSFGKGHSPHPSLEGFEDEKECITTGSEDEVGHT 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00308 312 ProSitePatterns Zinc finger C2H2 type domain signature. 152 172 IPR013087 -
Bach9g00308 312 SMART c2h2final6 197 229 IPR013087 -
Bach9g00308 312 SMART c2h2final6 150 172 IPR013087 -
Bach9g00308 312 SMART c2h2final6 234 254 IPR013087 -
Bach9g00308 312 Gene3D Classic Zinc Finger 232 285 - -
Bach9g00308 312 SUPERFAMILY beta-beta-alpha zinc fingers 141 173 IPR036236 -
Bach9g00308 312 Pfam Zinc finger, C2H2 type 150 169 IPR013087 -
Bach9g00308 312 Gene3D Classic Zinc Finger 149 172 - -
Bach9g00308 312 FunFam Zinc finger protein WIP2 203 285 - -
Bach9g00308 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 234 254 IPR013087 -
Bach9g00308 312 ProSiteProfiles Zinc finger C2H2 type domain profile. 150 177 IPR013087 -
Bach9g00308 312 SUPERFAMILY beta-beta-alpha zinc fingers 220 254 IPR036236 -
Bach9g00308 312 PANTHER ZINC FINGER PROTEIN WIP2 28 299 IPR043584 GO:0003700|GO:0010468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00308 Bach-Chr9 2228148 2231098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00308 7 303 C2H2 Transcription Factor Family AT1G08290 57.522 7.59e-127 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach9g00308 zf-C2H2_6 0.00014 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00308 - - gmx:100802773 496.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01175 13 16204194 16206617 Bach9g00308 9 2228148 2231098 BWGD