Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00302 TCCGATCTGATCCTTTCCCCTGATTCTTAAGAGGGAGAGAAACCTTTTTAGGTTTTCCGTTTATCAGATACCTATAGCGATTTCCCCTCATCGATTCCCAGAAATGATTTTATTGCTGCTTTAGGGTTTTCGTTTCCTTGCCAATATTTCAATTTCCTTATTCTCTAATCTAATTCTTCTATGCTCTTGGTCGGAGGCACAAGAAGATGTACAGTAATTTCAAGGAGCAAGCGATAGAGTACGTGAAGCAAGCTGTGCAGGAAGACAATGCTGGGAATTATGCAAAAGCGTTTCCTTTGTATATGAATGCTTTGGAGTACTTTAAGACCCATTTGAAGTACGAGAAAAACCCTAAGATCAAAGAAGCGATCACCCAGAAATTCACCGAGTATCTGCGGCGGGCGGAGGAGATCCGAGCTGTTCTTGATGACGGAGGGCCTGGCCCAGCTTCCAATGGGGATGCTGCAGTAGCTACACGGCCCAAGACGAAGCCTAAGGATGGTGAAGGAGATGGGGAGGACCCCGAGCAGACTAAGCTCAGGGCTGGTCTCAATTCAGCCATTATTCGGGAGAAACCAAATGTCAAGTGGAACGACGTTGCTGGGTTGGAAAGCGCCAAGCAAGCCTTGCAGGAGGCGGTCATTCTTCCCGTGAAGTTCCCGCAGTTCTTTACTGGTAAAAGACGACCCTGGAGAGCTTTTCTCTTGTACGGGCCACCCGGAACAGGGAAATCATATTTGGCCAAGGCTGTTGCAACGGAAGCAGAATCCACTTTTTTCAGTATTTCATCATCAGACTTGGTTTCGAAGTGGATGGGTGAAAGTGAAAAGTTGGTGTCAAACCTCTTTGAAATGGCTCGGGAAAGTGCTCCTTCCATTATTTTTATTGATGAAATAGATTCCCTATGCGGTCAGAGAGGAGAAGGCAATGAAAGTGAAGCTTCAAGACGGATCAAGACTGAACTTCTAGTACAGATGCAGGGTGTAGGACACAATGATCAGAAAGTTCTTGTTCTTGCAGCAACAAATACACCCTATGCTCTAGATCAGGCAATAAGGAGGCGTTTTGATAAGCGTATATACATTCCTCTGCCAGATTTGAAAGCTCGACAACACATGTTCAAGGTGCATTTAGGAGATACACCCCATAATTTGACTGAAAGTGATTTTGAACATTTAGCCCGAAGGACAGAGGGGTTTTCAGGTTCAGATATATCTGTCTGTGTTAAGGATGTTTTATTTGAGCCCGTTCGCAAAACCCAAGATGCCATGTTTTTCTTTAAGAATTCCGAGGGAATGTGGATCCCGTGTGGACCAAAGATACAAGGTGCGGTGCAAACTACAATGCAGGAGCTTGCTGCAAAAGGACTTGCTGCTAAGATCCAACCACCACCTATTTCTAAAACAGATTTTGATAAGGTGCTTGCCAGACAAAGGCCTACAGTAAGCAAAGCTGACCTTGATGTTCAGGAGAGATTCACGAAGGAGTTTGGAGAGGAAGGTTGAGTCCAATGATATTTCACTTAAAAGAACCAGACAGTTTGAAGTCATTGTTATAATTTGTAACTTACTAGCTGTTGGATAAAGTGAATTGCATTTTTATTTTTATTTTTAATTTAGTTTGGGGGGTTGCGATTCCCCTTTTGCACCGAGATGGAT 1658 0.4391 MYSNFKEQAIEYVKQAVQEDNAGNYAKAFPLYMNALEYFKTHLKYEKNPKIKEAITQKFTEYLRRAEEIRAVLDDGGPGPASNGDAAVATRPKTKPKDGEGDGEDPEQTKLRAGLNSAIIREKPNVKWNDVAGLESAKQALQEAVILPVKFPQFFTGKRRPWRAFLLYGPPGTGKSYLAKAVATEAESTFFSISSSDLVSKWMGESEKLVSNLFEMARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNTPYALDQAIRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLTESDFEHLARRTEGFSGSDISVCVKDVLFEPVRKTQDAMFFFKNSEGMWIPCGPKIQGAVQTTMQELAAKGLAAKIQPPPISKTDFDKVLARQRPTVSKADLDVQERFTKEFGEEG 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00302 432 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 427 IPR027417 -
Bach9g00302 432 Pfam ATPase family associated with various cellular activities (AAA) 166 295 IPR003959 GO:0005524|GO:0016887
Bach9g00302 432 FunFam vacuolar protein sorting-associated protein 4A 297 412 - -
Bach9g00302 432 SUPERFAMILY MIT domain 2 81 IPR036181 -
Bach9g00302 432 FunFam Vacuolar protein sorting-associated protein 4 124 304 - -
Bach9g00302 432 SMART AAA_5 161 297 IPR003593 GO:0016887
Bach9g00302 432 Gene3D - 297 412 - -
Bach9g00302 432 SMART smart 2 79 IPR007330 -
Bach9g00302 432 PANTHER AAA DOMAIN-CONTAINING 16 430 - -
Bach9g00302 432 Pfam Vps4 C terminal oligomerisation domain 365 429 IPR015415 -
Bach9g00302 432 Gene3D - 124 419 IPR027417 -
Bach9g00302 432 MobiDBLite consensus disorder prediction 73 110 - -
Bach9g00302 432 CDD RecA-like_VPS4 123 293 - -
Bach9g00302 432 Gene3D - 6 75 - -
Bach9g00302 432 FunFam Suppressor of K+ transport growth defect 1 6 75 - -
Bach9g00302 432 CDD MIT_VPS4 4 77 IPR045253 -
Bach9g00302 432 MobiDBLite consensus disorder prediction 91 109 - -
Bach9g00302 432 ProSitePatterns AAA-protein family signature. 267 286 IPR003960 GO:0005524|GO:0016887
Bach9g00302 432 Pfam MIT (microtubule interacting and transport) domain 7 70 IPR007330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00302 Bach-Chr9 2203582 2207582 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00302 160 353 Calmodulin-binding Proteins AT3G56690 36.735 2.98e-35 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00302 K12196 - qsa:O6P43_028513 836.639