Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00275 ATGAATCACCTCAAGAACCCGTCTGTCCCTAAATCATTACCTAAAACCCTAGCTTGTTTCTTCCCACTTGCAATGGAGTTCTGGGGTGTTGAGGTCAAGAGTGGGGAGACTGTTAAAGTCGATCCTGAGGAATTTGATGCATACATACATCTTTCACAGGCTGCTCTGGGGGAGTCTAAGAAAGATAGTGGAAGCGAGGCAGTGGTTCTTCATTTGAACATTAATAACCAGAAGCTTGTTTTGGGAACTCTTTCTAGGGAAAAATTTCCTCAGCTATCATTTGATATTGTTATTGATAAGGAATTTGAGCTCTCTCACAATTGGAAAAATGGAAGCGTCTATTTCTGTGGATACAAAGCTGACGTGCCAGATGACGAGGGTGACTTTGATGATGAGAGCATTGATTATGAGGATCTCCCAGTGATCTCCAATAACAATGGAAAACCTGTGGCAAAGACCGAAGAAGTTAAGAATGGTACTCTTAAAAAACCTGTTGCTAAAGGTCCTTCAGCGAATCAAGTAAATGTTCTTAAAAAGAAAGATGAAGAGGACTCAGAAGATGATGACAATGATGATGATTCTGATGAAGAAGATGATGAAGCTGGAAGTTCTGAAGAGGACGTGATGGATGCTGATTCTGATAGTGATGATGATGAGAGCGATGAAGATGACGAGGAGACGCCTCCTAAGAAGGCTGGTCAGGACAAGAGGAGACCTAACGATTCAGCCTCTAAAACTCCTAGTCCTTCCAAGAAAGCTAAATCTGCTACTCCACAGAAGACTGATAGCAAGAAAGGTGGTAACACAGCCACTCCTCACTCTAAGAAGGATACAAAGAGTCCCAACAGTGACTCTAAGTCTGGTGGACAGTTCACATGCAAATCCTGCAGCAAGTCTTTCAACTCTGAAGGTGGTCTGCAGCAACATTCGAAGGCGAAGCACGCTTGA 948 0.4304 MNHLKNPSVPKSLPKTLACFFPLAMEFWGVEVKSGETVKVDPEEFDAYIHLSQAALGESKKDSGSEAVVLHLNINNQKLVLGTLSREKFPQLSFDIVIDKEFELSHNWKNGSVYFCGYKADVPDDEGDFDDESIDYEDLPVISNNNGKPVAKTEEVKNGTLKKPVAKGPSANQVNVLKKKDEEDSEDDDNDDDSDEEDDEAGSSEEDVMDADSDSDDDESDEDDEETPPKKAGQDKRRPNDSASKTPSPSKKAKSATPQKTDSKKGGNTATPHSKKDTKSPNSDSKSGGQFTCKSCSKSFNSEGGLQQHSKAKHA 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00275 315 ProSiteProfiles Zinc finger C2H2 type domain profile. 291 315 IPR013087 -
Bach9g00275 315 MobiDBLite consensus disorder prediction 226 242 - -
Bach9g00275 315 Pfam Nucleoplasmin-like domain 27 118 IPR041232 -
Bach9g00275 315 MobiDBLite consensus disorder prediction 283 308 - -
Bach9g00275 315 MobiDBLite consensus disorder prediction 243 268 - -
Bach9g00275 315 Gene3D Classic Zinc Finger 278 315 - -
Bach9g00275 315 MobiDBLite consensus disorder prediction 184 225 - -
Bach9g00275 315 SUPERFAMILY beta-beta-alpha zinc fingers 280 313 IPR036236 -
Bach9g00275 315 FunFam Histone deacetylase HDT1 25 124 - -
Bach9g00275 315 Gene3D Nucleoplasmin core domain 22 124 - -
Bach9g00275 315 MobiDBLite consensus disorder prediction 128 315 - -
Bach9g00275 315 ProSitePatterns Zinc finger C2H2 type domain signature. 293 314 IPR013087 -
Bach9g00275 315 SMART c2h2final6 291 314 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00275 Bach-Chr9 2004843 2007331 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00275 25 315 C2H2 Transcription Factor Family AT5G03740 37.931 2.55e-49 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach9g00275 NPL 1.5e-13 CL0055
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00275 - - lang:109358867 278.87
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01206 13 16474702 16477090 Bach9g00275 9 2004843 2007331 BWGD