Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00261 ATGTCTCGCCGCGGTGGCAGTAGACAACCTGAACAGCGCCGATATCAACCGTCTCCGGCGTCATCCCGCTCCGTGCAAGGTGGTGGAGCTGGACGAGGCCGTGATGGAGCTGGACGAGGCCGTGGTGGAGCTGGACGAGGCCGTGGTGGAACTCCTGATCCCGTCTCCCATTCTGCGCCTTCGCCTGTGCCGTATTCCCCTCTTTCAGCAGTACTTCCTCCGTCAACATCTTCTGAAGCTCCCTCCAGCTCCTCAACTCCGCAGCTACATGTGTCTTCCACGGAAGCTCCATCCGTTGTTTCGGCTTCAGGTCCAGTGGATACTTTACCTTCTGAGCTTGAGCAGGGGCTCACGTTGCAATCTTCAGCGCCGTCATCGTCGAAGGCTATAAGGTTTCCCGACCGGCCAAATTACGGTAGAATTGGTAATAGAATTAAAGTTCGTGCCAATCATTTTATGGTACAAGTTGCAGACCGCGATATCCATCATTATGATGTGTCTATAACGCCGGAGGTTACTTCGAAGAACGTTAACAGGAAAGTGATGAGCCAATTAATTAAATTGTATCACGAGTCACACCTGGGAAGACATATACCGGCTTATGATGGCCGAAAGAGTCTTTTCACAGGAGGCCCTTTACCCTTCTCGTCAAAGGAATTTGCAGTCAAGTTGGTTGACAATGATGAACAAGCTACATCTTCTGGTTCAGCTAGAAAAGAACGTGAATTTAAGGTCACCATTCGATATGCTTCTCAGGCTGACATGCATCATCTTCAACAGTTTCTAAGGCGTTTACAGCTAGATGCTCCACAAGAAACCATACAAGCACTTGATGTTGCTCTAAGGGCATTACCATCGGAAAAGTTTACTGTCGTGGGGAGGTCATTTTTCTCACCACTTTTGGGGCGAAGGGGTGAGCTTGGCAATGGTCTGGAATATTGGAAAGGATATCATCAAAGCCTTCGCCCAACCCAAATGGGACTTTCCCTAAACATTGATGTGTCCGCTAGGGCATTCTATGAAGAAATCCTTGTGACTGAATTTATTGTGAAACATTTTAATTTCAATATTTCAAATCGTCTTTCTGATCAAGATCGTGTTAAGGTTAAGAAGGCTTTGAGAGGACTTAAGGTAGACCTGATTCACAGCGAGTATAGAAGGAGTTACAAAGTCACTGGAATCTCAAAAGAGCCACTCAGCGATTTAACTTTTACTCTGGATGACAAGAAAACGAAAAAGTCAGTGGTTCAATATTTCCGTGAAAAGTACAATCTTGTGATAAAGCATTTGGCTCTTCCTGCCCTCCAAGCTGGCAGTGACAAAAAGCCAGTTTATTTGCCTATGGAGCTATGTCGAATTGCTGCTGGACAGAGGTATTCCAAGAGATTAAATGAGACGCAAGTGACTGCTCTTCTAAGGGCAACCTGTCAGCGTCCCCATGAGAGGGAAGCATCCATTAAGCAGATGGTTCGGCAAAACAACTTCAATAGAGATGAGCTTGTATATAGGGAATTTGGAATTCAAGTGAGGGAAGAACTACCATTGATTGATGCTCGTGTTTTGCCTGCACCAATGCTTAAATATCATGATACTGGGAAAGAATCAAGGGTCAACCCCAGGATGGGGCAATGGAATATGATAAACAAGAAAATGGTTGATGGAGGTAGGGTGCAATACTGGACTTGTCTTAACTTTTCCACACGAGTCAACAGGGAGTTGCCATCTCAATTTTGTTTTGAGTTGATCAACATGTGTACCAGCAAGGGAATGGTTTTCAACCAAGATCCTTTGATCCCTATCAGCTCAGCTAATTCTAGGCAAATAGATAAAGCTCTCCTGAATCTTCACAATCAATCTGTGGCCAAGCTTCAAAGCATGAAGCAGGAGGGGAAGCTTCAGTTGTTGATAATAATTTTGCCTGATGTCCGTGGGCTTTATGGAACGATAAAACGCATATGTGAAACAGAACTGGGAATAGTTTCTCAATGCGTTCAACCCAGGCAAGCTTCAAAGTTAAATAAGCAGTATCTTGAAAATGTAGCACTGAAGATTAATGTCAAGGTTGGCGGACGAAACACAGTTTTAAACGATGCAGTTCAGAGAAGAATTCCGCTTGTGACTGATATGCCTACAATAATCTTTGGTGCCGATGTTACACATCCACAACCAGGAGAGGACTCAAGCCCATCTATAGCTGCGGTAGTGGCATCCATGGATTGGCCAGAGGTCACAAAGTACAGGGGACTTGTGTCTGCTCAATCTCACCGTGAGGAAATCATTGAAGATCTCTATAAAACTGTTCAAGATCCTCAGAGGGGACTTGTTCAAGGTGGAATGATTAGGGAGCTGCTTATTGCATTTCGTAGATCAACTAAGTTTAAACCTGAGAGGATTATTTTCTACAGAGATGGAGTTAGTGAAGGTCAATTTAGTCAGGTTCTGCTTTATGAGATGGAAGCAATAAGAAAGGCTTGTGCTTCATTAGAGGAAGGATATTTACCACCAGTTACCTTTGTGGTGGTGCAGAAAAGACATCACACCCGTCTCTTTCCTGCAGATTATAATAGTCGTGATCAGATGGATAGAAGCGGAAATATTCTGCCAGGTACTGTTGTTGATACGAACATTTGCCACCCCAGAGAATTTGACTTTTACCTCAACAGCCATGCTGGAATTCAGGGAATGAACCGGCCGGCGCATTATCATGTACTGTTTGACGAAAACAACTTCAAGGCGGATGAGTTGCAGACCTTAACAAACAATTTGTGTTACACGTTTGCAAGGTGCACTCGATCAGTTTCGATAGTTCCTCCTGCTTATTATGCACACTTAGCGGCATTTCGAGCTCGCTACTACATTGAAGGTGAATCAGAATCTGATTCTGGAAGCGGAGGTAGGACCACTACCGCGCGGGTGACTCTTCCGCAAATCAAGGAGAATGTCAAAGACGTGATGTTTTACTGCTGAAGTCGGTGTGGATATTTTGGATAAATATTAAGATGCAAACGCCGAAGTCTTATTTTCTTTTGTTCGGAACTGTTTCATTATTTTTGGTCTGTCGTCTCATTGTATGCGATAATTATTACCATCAGCCCCTTGGCACCTTGCTGTAAAACTACGCTTGATATATCGCATAACTTCTCGGAGACGACGTTATGTCATTACAAAGACTGATGATCTGAACTGTTTAATCGTATTTACCTTAGTAATGAAAATGATGATTAAAGTTTATTAGT 3236 0.4391 MSRRGGSRQPEQRRYQPSPASSRSVQGGGAGRGRDGAGRGRGGAGRGRGGTPDPVSHSAPSPVPYSPLSAVLPPSTSSEAPSSSSTPQLHVSSTEAPSVVSASGPVDTLPSELEQGLTLQSSAPSSSKAIRFPDRPNYGRIGNRIKVRANHFMVQVADRDIHHYDVSITPEVTSKNVNRKVMSQLIKLYHESHLGRHIPAYDGRKSLFTGGPLPFSSKEFAVKLVDNDEQATSSGSARKEREFKVTIRYASQADMHHLQQFLRRLQLDAPQETIQALDVALRALPSEKFTVVGRSFFSPLLGRRGELGNGLEYWKGYHQSLRPTQMGLSLNIDVSARAFYEEILVTEFIVKHFNFNISNRLSDQDRVKVKKALRGLKVDLIHSEYRRSYKVTGISKEPLSDLTFTLDDKKTKKSVVQYFREKYNLVIKHLALPALQAGSDKKPVYLPMELCRIAAGQRYSKRLNETQVTALLRATCQRPHEREASIKQMVRQNNFNRDELVYREFGIQVREELPLIDARVLPAPMLKYHDTGKESRVNPRMGQWNMINKKMVDGGRVQYWTCLNFSTRVNRELPSQFCFELINMCTSKGMVFNQDPLIPISSANSRQIDKALLNLHNQSVAKLQSMKQEGKLQLLIIILPDVRGLYGTIKRICETELGIVSQCVQPRQASKLNKQYLENVALKINVKVGGRNTVLNDAVQRRIPLVTDMPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPEVTKYRGLVSAQSHREEIIEDLYKTVQDPQRGLVQGGMIRELLIAFRRSTKFKPERIIFYRDGVSEGQFSQVLLYEMEAIRKACASLEEGYLPPVTFVVVQKRHHTRLFPADYNSRDQMDRSGNILPGTVVDTNICHPREFDFYLNSHAGIQGMNRPAHYHVLFDENNFKADELQTLTNNLCYTFARCTRSVSIVPPAYYAHLAAFRARYYIEGESESDSGSGGRTTTARVTLPQIKENVKDVMFYC 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00261 988 Pfam Argonaute linker 2 domain 481 528 IPR032472 -
Bach9g00261 988 Gene3D - 703 988 IPR036397 GO:0003676
Bach9g00261 988 Pfam Piwi domain 636 953 IPR003165 GO:0003676
Bach9g00261 988 Gene3D paz domain 337 459 - -
Bach9g00261 988 FunFam Argonaute 10 520 696 - -
Bach9g00261 988 MobiDBLite consensus disorder prediction 11 25 - -
Bach9g00261 988 SMART PAZ_2_a_3 347 471 IPR003100 GO:0005515
Bach9g00261 988 SMART DUF1785_2 290 342 IPR014811 -
Bach9g00261 988 SUPERFAMILY Ribonuclease H-like 624 954 IPR012337 -
Bach9g00261 988 CDD PAZ_argonaute_like 345 454 - -
Bach9g00261 988 SUPERFAMILY PAZ domain 145 496 IPR036085 GO:0005515
Bach9g00261 988 Pfam PAZ domain 368 471 IPR003100 GO:0005515
Bach9g00261 988 ProSiteProfiles Piwi domain profile. 634 954 IPR003165 GO:0003676
Bach9g00261 988 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 129 955 - -
Bach9g00261 988 CDD Piwi_ago-like 503 953 IPR045246 -
Bach9g00261 988 ProSiteProfiles PAZ domain profile. 343 455 IPR003100 GO:0005515
Bach9g00261 988 Pfam Argonaute linker 1 domain 292 341 IPR014811 -
Bach9g00261 988 MobiDBLite consensus disorder prediction 1 140 - -
Bach9g00261 988 SMART Piwi_a_2 634 954 IPR003165 GO:0003676
Bach9g00261 988 Pfam Mid domain of argonaute 538 617 IPR032473 -
Bach9g00261 988 FunFam protein argonaute 10-like 702 988 - -
Bach9g00261 988 Pfam N-terminal domain of argonaute 144 281 IPR032474 -
Bach9g00261 988 Gene3D - 520 697 - -
Bach9g00261 988 MobiDBLite consensus disorder prediction 113 128 - -
Bach9g00261 988 MobiDBLite consensus disorder prediction 70 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00261 Bach-Chr9 1878286 1884877 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00261 75 988 Eukaryotic Initiation Factors Gene Family AT1G48410 59.043 0.0 1118
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00261 K11593 - qsa:O6P43_028455 1382.85