Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00248 ATGGCGAACGGTACGAATTCGGAGGAGTTCGTGGTGCTATCTCGGGTCCGGACGGGTCTGAAGAGAGAGTTCGCATTCGCCATGAAGGCTCAATCCGAGATATGTGGGTCTTTGGGTCGGACCCGAGCCAACAAGAACCGAAATGGGATTCAAGAAAGTCCGAGCAGGAAGAGGTCGAAGAAGTCTGGTTCGTCCGAGGCTGAGGCTAAGAGAGACGAGGAGAACAGACAGAATCTGGTTCATGTTGTACAGTTAAAGAATTCTGTGGGGGTGAAGGCCGAGGAGGATATTGGTGATGTAATGAGCGAGGAGGAGGCAAAAAGTGACGTGGTGGATCTTGGGAGTGAAGACGAATCCAAGAATCAAATGGGAGAATCGACAGGCAAGAGGGAACTCGAGAATGAAGCGGCAATACCCATTTGTGAGGAGGAGCCCATGAGCGACATGGTAGAAACTGTGAGCGACGATGAGCCCAAAAGTAGTCATATGTTAGAATCTTTGAAGGAGGAGGTAATGGATGAAATGGTGCTGCCCATTTGTGAAAATGAGGGCAAGGAGGAAGAAACAAACGAAACAGGTGTCCATAAGTCGTTGATGAACGAGACAGTTAAGAAGGAAGAGATGGAGATATGTCCTCCAACGGGAGAAGATATCAGCGGGTTAAACCCAATATCTGTTCAAGATGATTGTAAGGTGAAGGACACGTCAATTGAGAAGAAGCCGCTAAGGAGGTTTACGCGGTCGGCACTGAAACAGAAAGTGGATCATACTACGGTCAAAAACGATTGTGAAGAGGAGCCCAAGAGCGATGTGGTAGAAACTGTGAGCCACGATGAGCCCAAAAGCAGCAATATGTTAGAATCTTCAGAGGAGGAGGTAATGGATGAAATGGCGCAATCCATTTGTGAAATTGAGGGAAATGTGGAAGAAACAAACGAAACAGGTGTGCATAAGTCATTGACGAACGAGACAGTTAAGAAGGAAGAGATAAAGATATGTCCTCCAACGGGAAAAGATATCAGTGGGTTAAACCCAATTTCTGTTCAAGATGATTATAAGGTGAAGGACATGTCAATCGAGAAGCCAGTAAGGAGGTTTACGCGTTCGGCACTGAAACAGAAAGTGGATAATACTCCTGTCAAAAACGGTTGGGAATATGCTTGTGCCAAACCAATTGAAATCAGTGATAATGTTAAAAGGGAAAGCGAGTGTAGTTCATTATTCATGACGCCAACTCAAATAAAAATATCGAGAACTAGCTTGAAGAAGTTCCCTTCGAAGCTTAAGGACCTTCTAGCCACAGGGATTCTTGATGGAGTACCTGTGAAGTATATCCGGGGCTTGAAGGCACGAAAGCCTGGAGAAACGGGGCTCCAAGGAGTGATTAGAGGCTCTGGGATTGTTTGTTATTGCAAAGTTTGTAACGGAATCGAAGTTGTCACACCCACTGTGTTTGAGTTGCATGCTGGTAGTGCAAATAAACGCCCTCCAGAGTATATTTTCCTTGAGAGTGGGAACACTCTTCGTGATATCATGAATATGTGTTTGAATCTTCCTTTGGATACTTTGGAGAATGCTATCCAAAATGCTATTGGTGGATTCCCTATGAAGAAATCAGCCCTCTGTTTGAATTGCAGAGGGTATATTTCTGAAGCTAGCAAGGGATTGTCCAAAGTACTTTGTGATTCATGCATCAAATTAAAAGAGTCTCAACCTAGCCCCATGGCCAATTTGGCCACCCAAACAGCTGAGAATAGCAATTGCTCTGTTTCACTAGCAGCTACTCCCGGCTCTCCTGAACGTGTTTTGGTTCCAAAGTTATTGAAAAGTGGTATGAAGCACAGCACTTCTCAGGGTAGGAGTCAGGGAAGACTGACTAGGAAGGATCTACGCTTGCACAAGTTAGTCTTTGAGGAAGATGTGCTGCCAGATGGAACTGAAGTTGCCTACTATGTTCGTGGACAGAAACTGTTGGTTGGTTATAAAAAGGGGTTTGGAATTATTTGTAGCTGCTGCAACTCTGAGGTCAGCCCCTCACAGTTTGAAGCTCATGCTGGTTGGGCATCCAGACGCAAGCCTTACTTGCACATATACACATCTAATGGAGTCTCTCTCCATGAGTTGTCTATCTCCCTATCAAGAGGTAGGAGGTTTTCTGCCAATGAAAATGATGACCTCTGCAGTATATGTTCAGATGGAGGAGATCTTTTGTGCTGTGATGGATGCCCACGGGCTTTTCACATAGATTGTGTTCCGCTGGGAGGCATTCCAACTGGTACTTGGTATTGTAAATATTGCCAGAATCTTTTCCAGAAGGACAAATATGTGGAGCATAATGTCAATGCTTTGGCAGCTGGAAGGATTGCAGGCGTTGATCCTTTAGAACAGATAAACCAGAGATGCATTCGTATTGTCAAAAATCTAAAGGATCAGGGTGGATGTGCATTGTGCAGCAGAAGCCATGCTTTTAGTAAAAACTTTGGTCCTGGCACAGTGATTATATGTGATCAGTGTGAGAGAGAATATCATGTTGGGTGTTTGAAGGAGCATAATATGCAGAACTTAGAGGAAGTGCCTGAAGGAAACTGGTTCTGCTGTACAGAATGCGATAAAATTCATGCTACACTTCTAAATTTGGTGGCTTGTGGAGAAGCGAATCTCCCTGATTCCCTTCTGAGCATGATTAAAAAGAAGTTTGAAGAAAAAAGTTCAGAAACTGGGGGTGGTCTTGATATAAAATGGAGAATTCTGAATTGGAAGATGGCTTCTGATGTAGAAACCAGGCGGTTGCTCTCAAAGGCTTGTTCAATCTTCCATGAGCGGTTTGATCCTATTGTTGATGATGCTTCTGGCCGTGACTTCATCCCAATGATGCTTTATGGTAGGAACATTAGGGGTCAAGATTTTGGTGGGATGTACTGTGCGGTACTGACCGTCAACCAAACGGTGGTCTCTGCTGGAATATTTCGTATATTTGGGCAGGAAGTGGCTGAGCTTCCTTTAGTGGCAACGCCTACAGATTGCCAAGGACAGGGTTACTTCCAATCCTTGTTCTCTTGCATTGAGACGTTGCTTGGGTCTTTAAAAGTGAGTCACCTTGTCCTACCGGCTGCTGATGAAGCTGAATCGATATGGACCAACAAATTTGGATTTGCCAAGTTGGACCAAGATCAGATAAACAATTATAAGAAATATTATCAGATGATGATTTTCCAAGGGACATCAGTGCTACGGAAGTCGGTTCCAGTACTCTCAGTTCTTCAGACTTAG 3270 0.4443 MANGTNSEEFVVLSRVRTGLKREFAFAMKAQSEICGSLGRTRANKNRNGIQESPSRKRSKKSGSSEAEAKRDEENRQNLVHVVQLKNSVGVKAEEDIGDVMSEEEAKSDVVDLGSEDESKNQMGESTGKRELENEAAIPICEEEPMSDMVETVSDDEPKSSHMLESLKEEVMDEMVLPICENEGKEEETNETGVHKSLMNETVKKEEMEICPPTGEDISGLNPISVQDDCKVKDTSIEKKPLRRFTRSALKQKVDHTTVKNDCEEEPKSDVVETVSHDEPKSSNMLESSEEEVMDEMAQSICEIEGNVEETNETGVHKSLTNETVKKEEIKICPPTGKDISGLNPISVQDDYKVKDMSIEKPVRRFTRSALKQKVDNTPVKNGWEYACAKPIEISDNVKRESECSSLFMTPTQIKISRTSLKKFPSKLKDLLATGILDGVPVKYIRGLKARKPGETGLQGVIRGSGIVCYCKVCNGIEVVTPTVFELHAGSANKRPPEYIFLESGNTLRDIMNMCLNLPLDTLENAIQNAIGGFPMKKSALCLNCRGYISEASKGLSKVLCDSCIKLKESQPSPMANLATQTAENSNCSVSLAATPGSPERVLVPKLLKSGMKHSTSQGRSQGRLTRKDLRLHKLVFEEDVLPDGTEVAYYVRGQKLLVGYKKGFGIICSCCNSEVSPSQFEAHAGWASRRKPYLHIYTSNGVSLHELSISLSRGRRFSANENDDLCSICSDGGDLLCCDGCPRAFHIDCVPLGGIPTGTWYCKYCQNLFQKDKYVEHNVNALAAGRIAGVDPLEQINQRCIRIVKNLKDQGGCALCSRSHAFSKNFGPGTVIICDQCEREYHVGCLKEHNMQNLEEVPEGNWFCCTECDKIHATLLNLVACGEANLPDSLLSMIKKKFEEKSSETGGGLDIKWRILNWKMASDVETRRLLSKACSIFHERFDPIVDDASGRDFIPMMLYGRNIRGQDFGGMYCAVLTVNQTVVSAGIFRIFGQEVAELPLVATPTDCQGQGYFQSLFSCIETLLGSLKVSHLVLPAADEAESIWTNKFGFAKLDQDQINNYKKYYQMMIFQGTSVLRKSVPVLSVLQT 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00248 1089 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 714 790 IPR013083 -
Bach9g00248 1089 SUPERFAMILY FYVE/PHD zinc finger 812 867 IPR011011 -
Bach9g00248 1089 ProSitePatterns Zinc finger PHD-type signature. 727 766 IPR019786 -
Bach9g00248 1089 Gene3D - 911 1079 - -
Bach9g00248 1089 ProSiteProfiles Zinc finger PHD-type profile. 724 769 IPR019787 -
Bach9g00248 1089 PANTHER AUTOIMMUNE REGULATOR 313 1080 - -
Bach9g00248 1089 CDD PHD1_AIRE 726 766 - -
Bach9g00248 1089 FunFam Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain 713 790 - -
Bach9g00248 1089 ProSitePatterns Zinc finger PHD-type signature. 814 869 IPR019786 -
Bach9g00248 1089 Pfam Tify domain binding domain 460 515 IPR032308 -
Bach9g00248 1089 Pfam Tify domain binding domain 660 708 IPR032308 -
Bach9g00248 1089 FunFam PHD finger family protein 911 1080 - -
Bach9g00248 1089 ProSiteProfiles Zinc finger PHD-type profile. 811 872 IPR019787 -
Bach9g00248 1089 MobiDBLite consensus disorder prediction 101 131 - -
Bach9g00248 1089 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 970 1058 IPR016181 -
Bach9g00248 1089 MobiDBLite consensus disorder prediction 38 80 - -
Bach9g00248 1089 MobiDBLite consensus disorder prediction 257 289 - -
Bach9g00248 1089 Pfam PHD-finger 727 768 IPR019787 -
Bach9g00248 1089 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 809 872 IPR013083 -
Bach9g00248 1089 MobiDBLite consensus disorder prediction 257 277 - -
Bach9g00248 1089 SUPERFAMILY FYVE/PHD zinc finger 715 769 IPR011011 -
Bach9g00248 1089 SMART PHD_3 726 767 IPR001965 -
Bach9g00248 1089 SMART PHD_3 813 870 IPR001965 -
Bach9g00248 1089 MobiDBLite consensus disorder prediction 51 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00248 Bach-Chr9 1781740 1788342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00248 358 510 PHD Transcription Factor Family AT2G36720 30.178 9.98e-06 48.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR PHD Bach9g00248 TDBD 1.4e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00248 - - pcin:129313514 1226.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01228 13 16658370 16664220 Bach9g00248 9 1781740 1788342 BWGD