Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00244 ATGAATTCAAGGGCAATATCTGGTTTCTCAAATGTTCCTCAAGAAGGCGTGCAGATATTTGGTGCAGATGAAGATTTGATTTCAGCTTCCATTGAAGCAAATTCTGGCGCAGGTTCACACTCGAGCTCCCTCCTCTTCAATCTCTCTGTTCTCAAAGACAAGATTAGTCAGTTGCAGACATTGGTGGGTGTTCTTATCACCCAAAACCAGAGCCCACCCGAGTCAACCACCATCCAAGACATCATAGTCACTGCCTCTTCCATGATATTCATTTGCCAACAAATGTCTCTTGGTCACCCTCCGCCAGGTACTACCACTAATTGCGCTGATGAATTCTACCAACGGCACCAATCCCATGATAGGTTACCACACTCAAACTTTGCCAATAATTGGCGACAAATTACCAACATAGGCCAAGATAGGGGGCAGAGTTTCTTTTCTAGCACTCAAACCTTGGACTGGTTTGGTGAAAGCTATACTTATACTGATTGTAATCTTAAGGAAGATGGTCCAAGTGTCACAATCAGTGAAACTAATAATAGTAGGAGAGACTTCTCATTAGGGGATAATGATCGAACAAACGAAGGGTTCAAAGGGCTTTCCCCAAAGAACTATGATATTATTGATTTGGATGCTGCGGATTTGTTGGCTAAGTACACACATTATTGCCAAGTTTGTGGGAAAGGGTTTAAGCGCGATGCGAATTTAAGGATGCACATGAGAGCTCATGGAGATGAGTACAAAACCAGTGCTGCCTTGAGTAACCCAATGAAGAATAAGGGGAACTTGGGTGAAGACAAAGATTGTTTGATGAGTGCAAGGCCTACGAAATATTCATGCCCACAACAAGGGTGCAGGTGGAACAGAAAGCATGCCAAATTCCAGCCTTTGAAGTCTATGATTTGTGCGAAGAATCACTATAAGAGAAGCCATTGCCCTAAGATGTACGTTTGCAAGAGGTGCAACCAAAAGAAATTTTCTGTACTTTCTGATCTGAGGACTCATGAGAAGCACTGTGGGGATCTCAAGTGGCAATGCTCCTGTGGCACCACATTTTCCAGGAAAGATAAGCTTATGGGACATGTTGCTTTGTTCGTTGGCCACACCCCAATCGGCAATGGCTTGTCGTTTTCAGGGAAATAA 1143 0.4357 MNSRAISGFSNVPQEGVQIFGADEDLISASIEANSGAGSHSSSLLFNLSVLKDKISQLQTLVGVLITQNQSPPESTTIQDIIVTASSMIFICQQMSLGHPPPGTTTNCADEFYQRHQSHDRLPHSNFANNWRQITNIGQDRGQSFFSSTQTLDWFGESYTYTDCNLKEDGPSVTISETNNSRRDFSLGDNDRTNEGFKGLSPKNYDIIDLDAADLLAKYTHYCQVCGKGFKRDANLRMHMRAHGDEYKTSAALSNPMKNKGNLGEDKDCLMSARPTKYSCPQQGCRWNRKHAKFQPLKSMICAKNHYKRSHCPKMYVCKRCNQKKFSVLSDLRTHEKHCGDLKWQCSCGTTFSRKDKLMGHVALFVGHTPIGNGLSFSGK 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00244 380 PANTHER PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 35 371 IPR044300 GO:0010044|GO:0010447
Bach9g00244 380 SMART c2h2final6 221 243 IPR013087 -
Bach9g00244 380 SMART c2h2final6 278 311 IPR013087 -
Bach9g00244 380 SMART c2h2final6 316 338 IPR013087 -
Bach9g00244 380 ProSiteProfiles Zinc finger C2H2 type domain profile. 221 248 IPR013087 -
Bach9g00244 380 Gene3D Classic Zinc Finger 215 274 - -
Bach9g00244 380 FunFam Zinc finger protein 574 220 245 - -
Bach9g00244 380 SUPERFAMILY beta-beta-alpha zinc fingers 219 246 IPR036236 -
Bach9g00244 380 ProSitePatterns Zinc finger C2H2 type domain signature. 223 243 IPR013087 -
Bach9g00244 380 Gene3D Classic Zinc Finger 314 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00244 Bach-Chr9 1768689 1769831 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00244 41 370 C2H2 Transcription Factor Family AT5G22890 48.696 9.27e-105 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach9g00244 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00244 - - gmx:100802769 460.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01233 13 16677702 16678856 Bach9g00244 9 1768689 1769831 BWGD