Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00243 ATGGAGATGGAAGCTTGCGCTGTCACTGGCTCTGGCTCTGGCACTGATGAATTTGCAGGGTCGTCGGTGAATATCAACGATGCCACGCAGATCCTGATCAAAGGGAAACGCACCAAGCGGCAGAGGCCTTTGTCGCCTTCTCTACCTTGTGCCGTTGCAGTTGCCACCGATAACATAATCACTTCTAGCTCCTCAAGTGCTTCTGAGGAGGGCACTCATGTTATTAGTGGCGGTGGAGGCGGTGATTGTGGTTCCTTTTCTTCTACCACAACAACTTACGAGAGCACCGAGGAAGAGGAAGACATGGCTAATTGTTTGATTCTCTTGGCTCAAGGTGATGCTGGCGCTCCTCTTCCTCATAAATCTAGCCATCCACATCAACTTCAAGGTCGAGCTACAGAACAAAGGGGTACCGGTAGCAACAGCAGCAGCAGCAGCCGAATTATTAGATTTGCTGAAATGGCCACTGCGTCTGCCACCGCCAGCAGCAAAATCGGAATCTTTATCTATGAGTGCAAAACATGTAACCGAACATTCCCTTCGTTTCAAGCGCTGGGAGGCCACAGGGCTAGCCACAAAAAGCCTAAGGTATGTCCTTCTTCTCCTGACGAAAAGAAACCACCACCATCATCACCACCGTTAACGTTATCCCGACCAAATTATGGCTTTGAAGAAGCTGCACAAGAGCAACCCTTAACCCATATCAAAACTGGGCCTCATCAAATTTCCCTTCAATTGCCCAGTAACAGATCGGGTTTCAATAACAACAACAAGGCGCCCAAGATCCATGAGTGTTCAATATGTGGGTCAGAATTCTCATCTGGGCAAGCATTGGGTGGGCACATGAGGAGGCATAGGGCATCCGCAAGAACTAGTTCTGATCAGGCGGCGGCGGCGACGGGCATTGAAGCAGCAAGTTGTGACACCTCCACTGCCGTTAACGTTCAAGTTAAGCCCAGAAATATTCTAGAATTGGATCTTAACCTGCCGGCGCCGGAAGACGATCTCCGGGAGTCCAAGTTTACGTTTACGCCAACACAGAAAACTCTGGTGTTGTCTGCTCCGGCTTTGGTGGGTTGCCATTATTAG 1089 0.4977 MEMEACAVTGSGSGTDEFAGSSVNINDATQILIKGKRTKRQRPLSPSLPCAVAVATDNIITSSSSSASEEGTHVISGGGGGDCGSFSSTTTTYESTEEEEDMANCLILLAQGDAGAPLPHKSSHPHQLQGRATEQRGTGSNSSSSSRIIRFAEMATASATASSKIGIFIYECKTCNRTFPSFQALGGHRASHKKPKVCPSSPDEKKPPPSSPPLTLSRPNYGFEEAAQEQPLTHIKTGPHQISLQLPSNRSGFNNNNKAPKIHECSICGSEFSSGQALGGHMRRHRASARTSSDQAAAATGIEAASCDTSTAVNVQVKPRNILELDLNLPAPEDDLRESKFTFTPTQKTLVLSAPALVGCHY 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00243 362 MobiDBLite consensus disorder prediction 126 145 - -
Bach9g00243 362 SUPERFAMILY beta-beta-alpha zinc fingers 170 285 IPR036236 -
Bach9g00243 362 Gene3D Classic Zinc Finger 168 285 - -
Bach9g00243 362 SMART c2h2final6 170 192 IPR013087 -
Bach9g00243 362 SMART c2h2final6 263 285 IPR013087 -
Bach9g00243 362 PANTHER ZINC FINGER PROTEIN ZAT5 89 343 - -
Bach9g00243 362 ProSitePatterns Zinc finger C2H2 type domain signature. 265 285 IPR013087 -
Bach9g00243 362 ProSiteProfiles Zinc finger C2H2 type domain profile. 263 290 IPR013087 -
Bach9g00243 362 ProSitePatterns Zinc finger C2H2 type domain signature. 172 192 IPR013087 -
Bach9g00243 362 MobiDBLite consensus disorder prediction 186 219 - -
Bach9g00243 362 ProSiteProfiles Zinc finger C2H2 type domain profile. 170 197 IPR013087 -
Bach9g00243 362 Pfam C2H2-type zinc finger 170 195 - -
Bach9g00243 362 Pfam C2H2-type zinc finger 263 287 - -
Bach9g00243 362 MobiDBLite consensus disorder prediction 116 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00243 Bach-Chr9 1761613 1762701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00243 27 362 C2H2 Transcription Factor Family AT2G28200 41.471 2.19e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach9g00243 zf-C2H2_6 1.5e-11 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00243 - - qsa:O6P43_028439 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01235 13 16687179 16688249 Bach9g00243 9 1761613 1762701 BWGD
Bach8g02758 8 34265394 34266353 Bach9g00243 9 1761613 1762701 ECH
Bach1g02473 1 36124160 36124945 Bach9g00243 9 1761613 1762701 ECH
Bach13g01235 13 16687179 16688249 Bach9g00243 9 1761613 1762701 ECH
Bach9g00243 9 1761613 1762701 Bach9g00243 9 1761613 1762701 ECH