Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00239 ATGGAGAAGAAGAAGAAGAAGACGAAGAAAATGATGGAGAGGAAGAGGAGAAGCCAAATGAAGGGGAAGCTCTATGCATTAGGCTCTTTGGTTCCTAACATAAGCAAGATGGACAAGGCTTCCATTGTTGGAGATGCCATTTCTTACGTGCGAGAGTTGCAAGCAGCTAAGAAGCTGAAGGCAGAAGTTGTAGGTCTTGAAGCATCCTTAATAGCGTCACAAAATTATCAAGGATCACTTGAAAACCTCAAGAAGGTTGTGATCTGCGAGAAGATCGTGCAGGTTTGTTTGTTCAAAATCCTTCGTATCAACGTGAGAACGAGCTTAAATCATTCTCTCTCACTTAAACATTTGTTGATTTGGTTCAGAATTCGAACTTGGCCGTATATTCTAACACGTTGAACTACATTTACACTGAATGTAAACTTGCATTTCCTTGTAATCTCACCTTATTCCTTTTGCCATTTAAATGATTCGTGCATTCACTTGCT 491 0.3992 MEKKKKKTKKMMERKRRSQMKGKLYALGSLVPNISKMDKASIVGDAISYVRELQAAKKLKAEVVGLEASLIASQNYQGSLENLKKVVICEKIVQVCLFKILRINVRTSLNHSLSLKHLLIWFRIRTWPYILTR 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00239 133 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 7 67 - -
Bach9g00239 133 Pfam Helix-loop-helix DNA-binding domain 5 54 IPR011598 GO:0046983
Bach9g00239 133 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 4 53 IPR011598 GO:0046983
Bach9g00239 133 SMART finulus 10 59 IPR011598 GO:0046983
Bach9g00239 133 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 60 IPR036638 GO:0046983
Bach9g00239 133 Gene3D - 1 63 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00239 Bach-Chr9 1744952 1745723 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00239 4 105 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G28160 50.467 4.95e-25 95.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bach9g00239 HLH 2e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00239 K26214 - gmx:100805451 114.39