Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00238 ATGGACACTGTAGCGGAGGTTCCATCGCTTTCTCACCTTTCAGATACTTCTCAATTCAATGACCAACGCGTTTCCTCTGTGGACCATGGAATTGGGAATTTCGGGTGCTCGCATTACAAGAGAAGATGCAAGATCAGAGCACCTTGTTGTAATGAGATTTTTGACTGCAGGCATTGCCATAATGAAGCTAAGAACTCCGACGAAATCAATCCTCTTGATCATCATGATATCCCACGCCATCAAGTTAAACAGGTCATCTGCTCCTTGTGTGAAACAGAACAAGATGTTCAACAGTATTGCATAAACTGTGGAGTATGCATGGGGAAATATTTCTGTGCTACATGTAAATTCTTCGATGATGATATATCGAAGAACCAATACCATTGTGATGAATGTGGCATCTGCAGAACTGGAGGCAAGGAAAACTTTTTTCACTGCCAGAAATGTGGATGTTGCTACTCTAAGGTTATGAAAGATGGGCACCGTTGCGTGGAAAAAGCAATGCATCACAATTGCCCTGTTTGCTTTGAGTACCTATTTGAGACGTTGAGGGATATTACTGTCTTACCTTGCGGGCATACCATACATTTGGACTGTGTTAAGGAGATGGAGAAACATTATAGGTACTCGTGTCCTGTTTGCTCCAAATCCATATGTGACATGTCAAGTTTGTGGAAGAAGCTTGACCAAGTGATTGCCTCAACTCCAATGCCTGAAACATACAAAGATAAGCTGGTATGGATACTCTGCAATGACTGTGGAGCAAACCGTGAAGTGCAATTTCACATTGTGGCGCACAAGTGCCAAAGTTGTAATTCATACAACACACGCCAGATACGAGGAAGTCCTACTACCTCATGCTCAATGGCTGAGATAGTGAGATGA 885 0.4271 MDTVAEVPSLSHLSDTSQFNDQRVSSVDHGIGNFGCSHYKRRCKIRAPCCNEIFDCRHCHNEAKNSDEINPLDHHDIPRHQVKQVICSLCETEQDVQQYCINCGVCMGKYFCATCKFFDDDISKNQYHCDECGICRTGGKENFFHCQKCGCCYSKVMKDGHRCVEKAMHHNCPVCFEYLFETLRDITVLPCGHTIHLDCVKEMEKHYRYSCPVCSKSICDMSSLWKKLDQVIASTPMPETYKDKLVWILCNDCGANREVQFHIVAHKCQSCNSYNTRQIRGSPTTSCSMAEIVR 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00238 294 SMART ring_2 172 214 IPR001841 -
Bach9g00238 294 SUPERFAMILY CHY zinc finger-like 33 107 IPR037274 GO:0008270
Bach9g00238 294 Gene3D - 244 285 - -
Bach9g00238 294 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 153 243 IPR013083 -
Bach9g00238 294 SUPERFAMILY Zinc hairpin stack 108 165 IPR037275 -
Bach9g00238 294 Pfam Ring finger domain 171 214 IPR001841 -
Bach9g00238 294 ProSiteProfiles Zinc finger CTCHY-type profile. 107 171 IPR017921 -
Bach9g00238 294 ProSiteProfiles Zinc finger RING-type profile. 172 215 IPR001841 -
Bach9g00238 294 SUPERFAMILY RING/U-box 170 220 - -
Bach9g00238 294 ProSiteProfiles Zinc finger CHY-type profile. 29 105 IPR008913 GO:0008270
Bach9g00238 294 Pfam CHY zinc finger 36 117 IPR008913 GO:0008270
Bach9g00238 294 Pfam Zinc-ribbon 219 277 IPR039512 -
Bach9g00238 294 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 29 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00238 Bach-Chr9 1741343 1743633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00238 34 281 C2H2 Transcription Factor Family AT3G18290 39.526 1.56e-55 191
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00238 K10144 - twl:120002403 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00238 9 1741343 1743633 Bach9g00238 9 1741343 1743633 ECH