Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00237 ATGCTCTTGTCTGTGCATTCACGCTTGTCTCTTGCTTATCACTACCCTGCATTAGGCATTAGGTCTCTGCTCCGTCTGAAATTTTCCCTGTTACCCTCAACATCGACATCAAGATTGAGTCCCCTTACTCTTGATTACTCAAACCATAACCATATAAATCGAAGCATGTCCTCCTCGTCGCGACCTTCTGCTTTCGATGCCCTTATGTCCGGCGCTCGCGCCGCCGCCAAAAAGAAACCCCAACCATCATCTCCCAAGAAACGGAAAACCCCTGATTCCAGTTCCACTCAAGAACTTAAAAGCCCAAAATCCATTGATGTTTCCCCACTTGGGACGACTCGCTTGTCATCAGAACCCATACAGGACTCGTACACCAACACCACACATTCCAAGAATACACCGGAATTGGGTGACAACTTGCGACCCATGTCTTCTCAGGAGAAGATTACTTATTTGAAGAAAAACATACCACAATTGAAGAAAAAACCTGGAGATTTTAATCCTAGTTTGGTAGCATGTTGGAACATAGATGAACCTTTGCCCTTCCTGTTTCTAGCATTGGCCTTCGACTTGATTGCACAAGAGTCTGGGCGGATTGTAATTACTGACATAGCTTGTAATATGTTGAGGACTGTCATGCATACTGCACCCGATGATTTGGTGGCTGTTGTTTATCTTTCCGCAAATAGGATTGCTCCGTCACACGAGGGTTTGGAGTTGGGAATAGGGGATTCTTCCATTATTAAAGCGCTTGCCGAGGCATTTGGAAGGACTGAATCACAGATAAAAAGTCAATATAAGGAAAAAGGTGATTTGGGTCTTGTTGCCAAAGCGAGTCGCTCATCTCAATCTATGATGCGGAAGCCGGATGCATTAACCATCAGGAAGGTTATCAACACGTTCCGTCTAATTGCCAAGGAATCGGGCAAAGACAGTCAAGAGAAGAAAAAGAATCATATGACGGCACTTCTTGTTGCTGCTACTGATTGTGAACCTCTATATCTGGTTCGCTTACTTCAGTCAAAACTGCGAATTGGCCTGGCAGAGCAAACTCTCTTAGCTGCTTTGGGCCAAGCTGCTGTGTACACTGAAGAACATTCTACACCACCTCCAGAAATTCAGTCTCCTTTAGAAGAGGCTGCAAAGATTATTAAACAGGTCTATTCTGTCCTTCCTGTTTATGACAAAATAGTCCCTGCCCTGCTTAGTGGTGGTATATGGAAACTTCCAAAGACATGCAACTTTACTCCTGGTGTTCCAGTTGGACCTATGCTGTCAAAAGCAACTAAGGGTGTATCTGAGATTCTAAACAAGTTCCAGGATGTGGAGTTTACTTGTGAATACAAATATGATGGAGAGCGTGCCCAGATACATTACATGGAGAACGGATCAGTTGAGATCTACAGTAGAAATGCTGAACGGAACACTGAAAAGTTTCCTGATGTCGTTGCTGCATTTTCAAGGTTAAAGAAACCATCTGTATCATCATTTGTCCTCGATTGTGAAATTGTTGCATATGACCGTGAAAAACACAGAATTCTGCCTTTCCAGGTCCTCAGTACTCGAAAAAGGAAAGATGTGGATATAAATGAGATAAAGGTCAATGTTTGCATATATGCTTTTGATTTGTTGTATCTTGATGGACAACCACTTCTTCAGGAACACCTGAAAATTCGTAGAAAGCATCTCTATGCCTCCTTTGAGGAAGAAACTGGATTTTTTCAGTTTGCAACGGCAATAACAACAAATGATGTTGAAGAAATGCAGAAATTTCTTGATGCAGCTGTTGATGAGAGTTGTGAGGGATTAATTATTAAAACATTAGATAAAGGTGCTACATATGAACCTTCCAAGCGGTCACTCAACTGGTTAAAATTGAAGAAAGATTATCTGGAAAACATAGGGGATTCGCTGGATTTGGTACCTATTGCTGCTTTCCATGGTCGTGGGAAACGTACTGGGGTCTATGGTGCGTTTCTCCTTGCTTGCTATGATGGCAATAATGAAGAATTCCAAAGCATTTGTAAGATAGGTGAGTGTTATGACACTGAGTCTCTGTTTATCAAAGTCTGTATAGTAATCTTCATGTCATGGTGTATAGGCACTGGATTTTCTGAAGCAATGCTTGAAGAACGGTCTGCTAGTCTTCGTTTGAAAGTGATTCCCAAACCAAAGCCATACTATCGGTATGCAGATACAATCAATCCTGATGTATGGTTTGAAGCCTGTGAAGTGTGGGAGGTGAAAGCAGCAGACTTGACTATTAGCCCTGTTCATCGTGCTGCTGTGGGCATAGTTGATTCGGATAAGGGAATTTCACTTCGATTTCCTCGTCTAGTTCGACTACGGGATGACAAAGCTCCTGAAGAAGCCTCATCATCTGAGCAGGTTGCTGAGATGTATAATGCTCAAAAGCACAATCACCAGAACAATCAAGATGACAGCGAAGATGATTGA 2457 0.4253 MLLSVHSRLSLAYHYPALGIRSLLRLKFSLLPSTSTSRLSPLTLDYSNHNHINRSMSSSSRPSAFDALMSGARAAAKKKPQPSSPKKRKTPDSSSTQELKSPKSIDVSPLGTTRLSSEPIQDSYTNTTHSKNTPELGDNLRPMSSQEKITYLKKNIPQLKKKPGDFNPSLVACWNIDEPLPFLFLALAFDLIAQESGRIVITDIACNMLRTVMHTAPDDLVAVVYLSANRIAPSHEGLELGIGDSSIIKALAEAFGRTESQIKSQYKEKGDLGLVAKASRSSQSMMRKPDALTIRKVINTFRLIAKESGKDSQEKKKNHMTALLVAATDCEPLYLVRLLQSKLRIGLAEQTLLAALGQAAVYTEEHSTPPPEIQSPLEEAAKIIKQVYSVLPVYDKIVPALLSGGIWKLPKTCNFTPGVPVGPMLSKATKGVSEILNKFQDVEFTCEYKYDGERAQIHYMENGSVEIYSRNAERNTEKFPDVVAAFSRLKKPSVSSFVLDCEIVAYDREKHRILPFQVLSTRKRKDVDINEIKVNVCIYAFDLLYLDGQPLLQEHLKIRRKHLYASFEEETGFFQFATAITTNDVEEMQKFLDAAVDESCEGLIIKTLDKGATYEPSKRSLNWLKLKKDYLENIGDSLDLVPIAAFHGRGKRTGVYGAFLLACYDGNNEEFQSICKIGECYDTESLFIKVCIVIFMSWCIGTGFSEAMLEERSASLRLKVIPKPKPYYRYADTINPDVWFEACEVWEVKAADLTISPVHRAAVGIVDSDKGISLRFPRLVRLRDDKAPEEASSSEQVAEMYNAQKHNHQNNQDDSEDD 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00237 818 ProSiteProfiles ATP-dependent DNA ligase family profile. 529 665 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bach9g00237 818 Pfam ATP dependent DNA ligase C terminal region 700 786 IPR012309 GO:0003910|GO:0006281|GO:0006310
Bach9g00237 818 Pfam ATP dependent DNA ligase domain 423 627 IPR012310 GO:0003910|GO:0005524|GO:0006281|GO:0006310
Bach9g00237 818 SUPERFAMILY ATP-dependent DNA ligase DNA-binding domain 165 414 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bach9g00237 818 ProSitePatterns ATP-dependent DNA ligase signature 2. 601 627 IPR016059 GO:0003909
Bach9g00237 818 FunFam DNA ligase 158 425 - -
Bach9g00237 818 Pfam DNA ligase N terminus 181 356 IPR012308 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bach9g00237 818 Gene3D - 632 817 IPR012340 -
Bach9g00237 818 Gene3D DNA ligase/mRNA capping enzyme 452 577 - -
Bach9g00237 818 PANTHER DNA LIGASE 1/3 FAMILY MEMBER 77 817 - -
Bach9g00237 818 MobiDBLite consensus disorder prediction 71 142 - -
Bach9g00237 818 SUPERFAMILY Nucleic acid-binding proteins 699 804 IPR012340 -
Bach9g00237 818 NCBIfam ATP-dependent DNA ligase 239 801 IPR000977 GO:0003910|GO:0005524|GO:0071897
Bach9g00237 818 MobiDBLite consensus disorder prediction 785 818 - -
Bach9g00237 818 Gene3D - 158 425 IPR036599 GO:0003677|GO:0003910|GO:0006281|GO:0006310
Bach9g00237 818 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 415 633 - -
Bach9g00237 818 CDD OBF_DNA_ligase_I 635 803 - -
Bach9g00237 818 ProSitePatterns ATP-dependent DNA ligase AMP-binding site. 447 455 IPR016059 GO:0003909
Bach9g00237 818 CDD Adenylation_DNA_ligase_I_Euk 412 630 - -
Bach9g00237 818 SUPERFAMILY Nucleic acid-binding proteins 635 682 IPR012340 -
Bach9g00237 818 FunFam DNA ligase 423 629 - -
Bach9g00237 818 Gene3D - 433 631 - -
Bach9g00237 818 MobiDBLite consensus disorder prediction 87 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00237 Bach-Chr9 1726474 1731620 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00237 18 818 Core DNA Replication Machinery Family AT1G08130 65.564 0.0 1066
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00237 K10747 - qsa:O6P43_028431 1127.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00237 9 1726474 1731620 Bach9g00237 9 1726474 1731620 ECH