Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00225 GAAGCCGAGCCTTAGATCTAAATTGTTTTTGCATTTGCTGAGTTTGTTTCCAATCTATTACAAAGATGGTTTCTGATGCGAGTAAGAAGAAGGCAGCACAGAAGAAGGCGGCCGCGGCTGCCAAGAGAGGAGGAAAGGCGGCAGCAGCAGCTTCATCTAAAGCAGCGGAGGCTCAGAAGGCAGCCGATAAGCTAGCTAATGGAATTGGGGAACTTCAGATTTCCGATCGGACTTGTACCGGCGTCCTCTGCTCACATCCTCTTTCAAGGGATATACGGATAGAGTCTCTGTCAGTGACTTTCCATGGACATGATCTGATAGTTGATTCTGAATTGGAGCTAAACTATGGAAGGCGTTATGGTTTGCTTGGATTAAATGGCTGTGGAAAATCTACTCTGCTTACTGCAATTGGTTGCCGGGAGCTTCCGATTCCTGAACACATGGATATTTATCACCTCTCCAGGGAAATTGAAGCTTCTGACATGTCATCATTGGAGGCTGTCATAAGCTGTGATGAGGAAAGGTTGAGATTGGAGAAAGAAGCTGAAGCTTTGGCAGCCCAAGATGATGGTGGTGGAGAAACTCTTGAGCGTATTTATGAACGATTGGAAGCCATGGATGCTTCAACTGCAGAAAAGCGTGCTGCGGAAATTTTGTATGGTCTTGGTTTTAACAAGCAGATGCAGGCTAAGAAGACACGTGATTTTTCTGGTGGCTGGAGAATGAGGATTGCATTAGCACGGGCTTTATTTATAAATCCAACCATTCTCTTGCTTGATGAGCCAACCAATCACCTTGATTTGGAAGCATGTGTGTGGCTGGAGGAGAATTTGAAAAAGTTTGAACGTATTCTGGTTGTGATTTCGCATTCGCAGGATTTCCTTAATGGTGTTTGCACAAACATCATCCACATGCAAAACAAAAAGCTGAAGCTTTATACTGGTAACTACGATCAATATGTTCAGACTCGCTCTGAACTGGAAGAGAATCAGATGAAGCAGTACAAATGGGAACAAGAGCAGATTGCCTCAATGAAGGAGTATATTGCCCGATTTGGGCATGGATCGGCAAAACTAGCTCGCCAGGCACAGAGTAAAGAGAAAACCTTAGCAAAAATGGAACGGGGTGGACTTACAGAGAAGGTGGTCAGGGATAAAGTTTTGGTCTTCCGTTTTGTTGATGTGGGAAAGCTTCCCCCTCCTGTTCTTCAGTTTGTTGAGGTTACATTTGGTTACACTCCTGATAATCTCATCTACAAGAACCTTGATTTTGGGGTAGATTTAGACTCGAGGATTGCATTGGTTGGACCCAATGGAGCTGGGAAGAGTACACTACTGAAGTTAATGACAGGTGATCTGGGTCCTATTGATGGTATGGTCCGCCGGCACAATCACCTTCGCATCGCACAATTCCATCAGCATTTGACTGAGAAGCTTGATTTAGAGATGCCTGCTCTCCAGTTTATGATCAAAGAGTACCCTGGAAATGAGGAAGAGAAGATGAGGGCAGCTATTGGGAGGTTTGGTCTGACAGGTAAAGCCCAGGTGATGCCTATGAAGAATTTGTCTGATGGGCAGAGGAGCCGGGTGATATTTGCATGGTTGGCTTGGAGGCAGCCTCACTTACTGCTTCTGGATGAACCAACTAACCATTTGGATATTGAAACAATAGACTCATTGGCCGAGGCATTGAATGAATGGGATGGGGGAATGGTGCTTGTTAGTCATGATTTTAGACTCATAAATCAGGTGGCCCATGAGATATGGGTTTGTGCAGATCAAACTGTGACCAGATGGGAGGGCGACATCATGGATTTCAAGGCGCATCTAAAGGCAAGGGCTGGTTTATCTGACTGA 1856 0.452 MVSDASKKKAAQKKAAAAAKRGGKAAAAASSKAAEAQKAADKLANGIGELQISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPEHMDIYHLSREIEASDMSSLEAVISCDEERLRLEKEAEALAAQDDGGGETLERIYERLEAMDASTAEKRAAEILYGLGFNKQMQAKKTRDFSGGWRMRIALARALFINPTILLLDEPTNHLDLEACVWLEENLKKFERILVVISHSQDFLNGVCTNIIHMQNKKLKLYTGNYDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKMERGGLTEKVVRDKVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLIYKNLDFGVDLDSRIALVGPNGAGKSTLLKLMTGDLGPIDGMVRRHNHLRIAQFHQHLTEKLDLEMPALQFMIKEYPGNEEEKMRAAIGRFGLTGKAQVMPMKNLSDGQRSRVIFAWLAWRQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHEIWVCADQTVTRWEGDIMDFKAHLKARAGLSD 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00225 596 CDD ABCF_EF-3 381 573 - -
Bach9g00225 596 ProSitePatterns ABC transporters family signature. 214 228 IPR017871 GO:0005524|GO:0016887
Bach9g00225 596 Gene3D - 70 334 IPR027417 -
Bach9g00225 596 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 381 596 IPR003439 GO:0005524
Bach9g00225 596 SMART AAA_5 94 296 IPR003593 GO:0016887
Bach9g00225 596 SMART AAA_5 406 573 IPR003593 GO:0016887
Bach9g00225 596 Pfam ABC transporter 397 528 IPR003439 GO:0005524
Bach9g00225 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 364 575 IPR027417 -
Bach9g00225 596 CDD ABCF_EF-3 70 287 - -
Bach9g00225 596 Coils Coil 288 308 - -
Bach9g00225 596 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 317 IPR027417 -
Bach9g00225 596 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 14 590 - -
Bach9g00225 596 Pfam ABC transporter 88 242 IPR003439 GO:0005524
Bach9g00225 596 Pfam ABC transporter 281 357 IPR032781 -
Bach9g00225 596 Gene3D - 350 594 IPR027417 -
Bach9g00225 596 FunFam Abc transporter f family member 1 70 334 - -
Bach9g00225 596 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 70 310 IPR003439 GO:0005524
Bach9g00225 596 FunFam ATP-binding cassette sub-family F member 3 341 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00225 Bach-Chr9 1631620 1635366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00225 201 268 Calmodulin-binding Proteins AT2G36910 42.857 1.17e-07 53.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00225 K06185 - gmx:100785099 1050.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01253 13 16813410 16816950 Bach9g00225 9 1631620 1635366 BWGD