Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00188 ATGGCGAAAGACGTAGAGGTTCAAGAGCAAGGTGGAGAGTACTCAGCTAAAGACTACCATGACCCACCACCAGCACCTTTGATCGATGCAGAGGAGCTGTCAAAGTGGTCTTTCTGGAGAGCCATCATCGCTGAGTTCATAGCAACGCTTCTATTCCTTTACATCACTGTGTTGACTATTATTGGATACAAGCACCAGATTGATGTTCCCAATGGTGACTGTGAGGGAGTCGGCGTTTTGGGTATCGCTTGGGCCTTCGGTGGCATGATTTTCATCCTCGTTTACTGCACCGCTGGTATCTCTGGTGGACACATCAACCCGGCTGTGACGTTCGGGCTGTTCCTGGGAAGGAAGGTGTCGCTAATCAGAGCTGTGCTGTACATGGTAGCACAGTGTGCTGGTGCTATTGCCGGTACTGGACTCGCCAAGGCCTTCCAAAAGTCTTACTATAACAGGTACGGTGGTGGGGCCAACTCCGTCTCTAGTGGCTACAACAAGGGTACCGCTTTGGGTGCAGAGATCATTGGTACCTTTGTTCTTGTCTACACTGTCTTCTCTGCCACTGATCCTAAGAGGAGCGCAAGAGACTCCCATGTTCCAGTGTTAGCACCACTACCAATTGGCTTCGCTGTGTTTATGGTGCACTTGGCTACCATCCCTATCACCGGTACCGGCATTAACCCAGCAAGGAGTTTTGGAGCAGCTGTGATCTACAACCAAGATAAACCCTGGGATGACCATTGGATTTTCTGGGTTGGACCATTTATTGGAGCTGCCGTGGCTGCATTCTACCATCAGTACATTCTTAGAGCTGCAGCCATTAAAGCTCTTGGATCTTTCAGGAGCAACGCTTAATTAATTATGATGGTGGATTTGTCCAACAAATTAAGGGCTATATATGTGGGTTTCCTCAAATAATAACTATTGGTATTGAGGAGTGGTGTCTGTCTGCAGGTCTATTTGGCGTTTTTCACTCTTTTAATTTCCTTATATGCTTCTGGTCTAGAGGAAAATGCCAAAAACGAAGGGCCATAAATTGTAGATAAACATGCTTTATGTCCCAGGGTGTATTTTTTATCCCTTTTCTCTTTTCCTTTATTTCCCTGTAATCCTCCCGTGTTTGTTTTCATATTATGTGCATCTTCATAACTGGTGTATTCATTTGTCTGCACATAAAACTTAGTACTTGTTTTGTTCAACTCATATTATCGTCTTG 1216 0.4548 MAKDVEVQEQGGEYSAKDYHDPPPAPLIDAEELSKWSFWRAIIAEFIATLLFLYITVLTIIGYKHQIDVPNGDCEGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRAVLYMVAQCAGAIAGTGLAKAFQKSYYNRYGGGANSVSSGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNQDKPWDDHWIFWVGPFIGAAVAAFYHQYILRAAAIKALGSFRSNA 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00188 284 NCBIfam MIP family channel protein 44 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g00188 284 SUPERFAMILY Aquaporin-like 32 270 IPR023271 -
Bach9g00188 284 CDD MIP 40 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g00188 284 FunFam Probable aquaporin PIP1-2 25 284 - -
Bach9g00188 284 Gene3D Glycerol uptake facilitator protein. 25 284 IPR023271 -
Bach9g00188 284 PRINTS Major intrinsic protein family signature 248 268 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g00188 284 PRINTS Major intrinsic protein family signature 172 190 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g00188 284 PRINTS Major intrinsic protein family signature 40 59 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g00188 284 PRINTS Major intrinsic protein family signature 123 142 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g00188 284 PRINTS Major intrinsic protein family signature 86 110 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g00188 284 PRINTS Major intrinsic protein family signature 208 230 IPR000425 GO:0015267|GO:0016020|GO:0055085
Bach9g00188 284 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 10 273 IPR034294 -
Bach9g00188 284 ProSitePatterns MIP family signature. 104 112 IPR022357 -
Bach9g00188 284 Pfam Major intrinsic protein 32 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00188 Bach-Chr9 1329016 1330564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00188 1 284 Major Intrinsic Protein MIP AT2G37170 80.769 4.99e-171 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00188 K09872 - gmx:100811119 526.554