Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00182 AGTGGATGTGTATGGCGTTATTATTGCTAAACTAGGCAATAGCAAAGTGATAACGGTAAGCTTGGTGTCTTCAAGGAGTGAGATTTCTTCCAGTTGTGGGTTTATTTCTTTACGCCAAAATGAGTACTGAGGAAAAACCTGGGGGTGTCTGGCATGATCCGGCTTCCTGCAGAAGAACAGTTTCTCTTCCAGTTGAAAAGGTTGATATTCCAATCGGAGTAGCTGAAGAATCCAGACATGTTCGTCATGGGAAGCGACCGAATCTTGTCCTGGATATACCCCCAAGAACAACAGAGGAGTCTTCTCAGGATTTTGTTAAAATCAAGATGCCTCTGACACCAAGCCCCTCTCCCACTCCAAAGAGAGTGAATTTTCTTGTATCTTCTCGCTCTGTTGATCCTCCCAATAGTAATGCTCCAGCGCCTTCATTGTCAAGAGCCAAATCTTCCATAAGAAGTTTCTTACCCAAATTGAGCTTCAGGTACAGGACATCAGATTCTGAAAAAGGACCAACTGCAGCTCTGGAAAGTTCCTCTTCGGGCCTTCTAGAAAAGCCTTCCATCTCGAGATCATTATCCCTTTCTAAGATATTTACTCCTAAGATTAAGAGAACATCATCATTGCCAGTAGATCAAATTCCACACTTAAACCCAGAATCTGCTCATGGTGGAAGTGTTCAGAGAAGAGAGTGCCAAGGGAAGATAGCTCGCTCCCTTTCAGTGCCTGCCATCTACAAAGAAAAAAGCTTGAGGAGAATGGATTCATTTTTCCGCGTTATTCCTACCACCCCTAGAGTGAAGGAAGGAAATGAAACGATAACCAAATCCCCAACAGCGGATCCTGAAAACGATGATTCTGATGCTGAAGATATAGCTGAAGAAGAGGCCGTGTGTAGAATTTGTTTAGTTGAGCTATGTGAAGGAGGTGAGACCTTCAAAATGGAATGCAACTGTAAAGGTGACCTTGCTCTGGCTCACCAAGAATGTGCAATTAAATGGTTCAGCATCAAGGGTAACAAGATCTGTGATGTGTGTAAGGAGGATGTCCGAAACCTACCTGTCACTCTCTTGCGGATCCAAAGCGTCCGCACTCGAAATACTGGAGCAAGTAGGTCTCAGCTGGCAGATGCAAATGGATACAGGCATGTGAATATTTTTTTTTTGGTTTGGCAGGAGGTGCCGGTGCTTGTCATTGTCAGCATGCTTGCCTATTTCTGTTTCCTTGAGCAGCTTTTGGTTGGAAAAATGGGTACTGGTGCAATTGCCATATCTCTTCCATTTTCCTGTGTACTGGGTCTACTCTCCGCCATGACATCATCAACCATGGTGAAGAGCAGGTTTATTTGGATTTATGCATCTATCCAGTTTGCTTTGGTGGTTCTCTCTGCACATTTGTTTTACTCCGTGGTTCATGTGCAAGCTATTCTGTCGATCCTTCTTGCAACATTTGCTGGGTTTGGTGTGGTGATGAGTGGGAGTTCTATTCTTGTTGAGTTTTTTAGATGGAGAAGAAGATGGCAGGCTCTATCTGATCAGCATCGTGGTTCTCAGGTTATGACACGAGCAGGACATAACCATGTAACTGTAAATATAGCAGATGCAGGTGCTCCCAACCAAACCTAAACTTGGGTGCCAAATCCAATACACTTCTAGTCACAGCTGAATTCTGAAGCTAATTTGAAATGGATGCAGTCAGTTGCATTTTCATTCAGGACGAAGCAAAACTTGTTGTAGGATAATTAGCGTCAAGAGACATTTTAATACTTCATCTCTATACAAGACTTCGTTGTACAGCTCATGTTGCAGTAATAGAATCACTCGAAAATAGTTTCTCTAGCCTTAGAGGATTTTTTATTTTTATTTTTTTTCAGTGTATCAAAGCCAGAAGGCTTCTTGCCTTCTTTTTTGTGGTGTTATGGTCTGAGACAAAGATTGAGGAAATTTATTTGCGAAGTTCGTAG 1960 0.426 MSTEEKPGGVWHDPASCRRTVSLPVEKVDIPIGVAEESRHVRHGKRPNLVLDIPPRTTEESSQDFVKIKMPLTPSPSPTPKRVNFLVSSRSVDPPNSNAPAPSLSRAKSSIRSFLPKLSFRYRTSDSEKGPTAALESSSSGLLEKPSISRSLSLSKIFTPKIKRTSSLPVDQIPHLNPESAHGGSVQRRECQGKIARSLSVPAIYKEKSLRRMDSFFRVIPTTPRVKEGNETITKSPTADPENDDSDAEDIAEEEAVCRICLVELCEGGETFKMECNCKGDLALAHQECAIKWFSIKGNKICDVCKEDVRNLPVTLLRIQSVRTRNTGASRSQLADANGYRHVNIFFLVWQEVPVLVIVSMLAYFCFLEQLLVGKMGTGAIAISLPFSCVLGLLSAMTSSTMVKSRFIWIYASIQFALVVLSAHLFYSVVHVQAILSILLATFAGFGVVMSGSSILVEFFRWRRRWQALSDQHRGSQVMTRAGHNHVTVNIADAGAPNQT 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00182 500 Pfam RING-variant domain 258 305 IPR011016 GO:0008270
Bach9g00182 500 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 243 313 IPR013083 -
Bach9g00182 500 PANTHER OS02G0165000 PROTEIN 41 479 - -
Bach9g00182 500 CDD RING_CH-C4HC3_MARCH 258 306 - -
Bach9g00182 500 MobiDBLite consensus disorder prediction 227 248 - -
Bach9g00182 500 MobiDBLite consensus disorder prediction 39 63 - -
Bach9g00182 500 MobiDBLite consensus disorder prediction 88 108 - -
Bach9g00182 500 ProSiteProfiles Zinc finger RING-CH-type profile. 250 312 IPR011016 GO:0008270
Bach9g00182 500 SMART ringv_2 257 306 IPR011016 GO:0008270
Bach9g00182 500 SUPERFAMILY RING/U-box 254 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00182 Bach-Chr9 1293610 1297804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00182 242 312 C3H Transcription Factor Family AT2G37950 45.833 8.23e-13 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00182 - - gmx:100815566 692.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01288 13 17128007 17132168 Bach9g00182 9 1293610 1297804 BWGD