Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00181 ATGGGGAACATCGGAAGCATTAGAGGGGGCCACCGTAGGAGGCGAAGTTATCCCCAGCCGGAAATTACCACAAATGCTAATGGCTTCGTTTATGTTTATACGGCTGCCGCACTCCATCCTTCTCAAAACCCAAATTCGTCAATGGTGCTGGGTCCAAATTCACGGTCTTCTCCCGGTGATGGAGTCAATCCTCCACCCGTTACTGCCAATATCGTTGATGGATCCAATTCCACTCCGTCCGCGTCCTATGTAGAGCATCAGAAAGCGGTGACAATCCGGAACCATGTAAATATCAAGAAGGAGACGCTGCGAATTGAACCCGATGAAGATAACCCCGGGAATTTCCTTGTAGCTTGCACCTTTGATGCTACTGCACCCGGAAGCATTACGATTATGTTTTTTGCGAAGGAAACAATAGACGGTAAGCTGATAGCAGTAAAGGAAATCATGGTAAAACAAGTCTCAATGCCGTTTCAACAAGGTCTCTGTCAGAAGTTTAAACAACCTTCTGGAACTGGTATTGGCTTCTCATTGTTAGAGGATACAGAACTAAAAAAAGAAGGGGATATGGAAGTTTATCCTCTCGTATTGAAGGCTGAAACTGATGGAAACCCATCACATAATTGTCAAGTCACGCTAGCAAGTTTCGAGAAGAGAGAGAAAGGCGATTATGAGGTCCAGGTAATGAAGCAGATTCTCTGGGTGAAAGGTGAGAAATATGAGCTGCAGGAGATATATGGAATTGGGAATACCGGTGAGGGTGACCTCGATGGCAATGATTCTGGAAGAGAATGTGTTATTTGCTTGTCAGAACCACGCGACATAACTGTCCTCCCTTGCCGACACATGTGCATGTGTAGTGGCTGTGCGAAGCTTCTGAGGTTACATACGGATAGCTGCCCCATATGTCGACACCCAGTCGAGCGACTTATGGAAATCAAAGTGAATAATGAACCTGGTGACCCATGA 969 0.4603 MGNIGSIRGGHRRRRSYPQPEITTNANGFVYVYTAAALHPSQNPNSSMVLGPNSRSSPGDGVNPPPVTANIVDGSNSTPSASYVEHQKAVTIRNHVNIKKETLRIEPDEDNPGNFLVACTFDATAPGSITIMFFAKETIDGKLIAVKEIMVKQVSMPFQQGLCQKFKQPSGTGIGFSLLEDTELKKEGDMEVYPLVLKAETDGNPSHNCQVTLASFEKREKGDYEVQVMKQILWVKGEKYELQEIYGIGNTGEGDLDGNDSGRECVICLSEPRDITVLPCRHMCMCSGCAKLLRLHTDSCPICRHPVERLMEIKVNNEPGDP 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00181 322 MobiDBLite consensus disorder prediction 1 21 - -
Bach9g00181 322 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 250 314 IPR013083 -
Bach9g00181 322 ProSiteProfiles Zinc finger RING-type profile. 265 304 IPR001841 -
Bach9g00181 322 CDD mRING-HC-C3HC5_MGRN1-like 263 304 IPR045195 -
Bach9g00181 322 SUPERFAMILY RING/U-box 264 310 - -
Bach9g00181 322 SMART ring_2 265 303 IPR001841 -
Bach9g00181 322 PANTHER MAHOGUNIN 58 316 IPR045194 GO:0061630
Bach9g00181 322 MobiDBLite consensus disorder prediction 44 80 - -
Bach9g00181 322 FunFam probable E3 ubiquitin-protein ligase LOG2 249 314 - -
Bach9g00181 322 Pfam Zinc finger, C3HC4 type (RING finger) 263 309 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00181 Bach-Chr9 1284568 1286642 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00181 83 284 C3H Transcription Factor Family AT3G09770 58.986 1.34e-79 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00181 - - qsa:O6P43_028360 419.083