Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00172 GTTGGTGGTTTGGTTGCTATTGACTCTCACATCACTAGAACTACACCTTGGTGTTCATGGAAATTGATCTGAACCATGCAGTGAGTGAGGTTGAGAATAATGCATTATTATGTAATGGGGAGTGTGAGAAGGGTGCTTGTGTTTGTTGTTTGTCCTCTTCGACTTGTTCCTCTTCTTCTTACTTGGAGCTTTGGCATGCTTGTGCTGGCCCCCTCACCTCCCTGCCTAAGAAAGGAAATGCGGTCGTGTATTTTCCACAAGGTCACTTAGAACAGGTGGCCTCTTTCTCTCCTATCTCACCCATGGAGATACCCACTTATGATCTTCAACCACAGATCTTTTGCAAGGTCGTCAATGTGCAGCTACTTGCCAATAAGGAGAATGATGAGGTTTATACGCAGGTTACCTTGCTTCCCCAGGCAGAGTTGGCAGGGTCGCATTCAGAGGGGAAGGAGCTTGAGGAATTGGGAGTTGATGAAGAGGGAAATGGAGGATCACCGACAAAGTCAACTCCTCACATGTTCTGTAAAACGCTTACAGCTTCTGATACCAGCACTCATGGTGGTTTCTCTGTTCCTCGTAGAGCTGCTGAAGACTGTTTTCCTCCTCTGGATTATAAGCAGCAGAGACCCTCTCAAGAACTTGTGGCAAAGGACCTGCATGGAGTGGAGTGGAAATTTCGCCACATCTACAGAGGTCAGCCGAGGCGACATCTGCTAACTACTGGCTGGAGTATTTTTGTTAGTCAGAAGAATCTTGTTTCTGGCGATGCGGTGCTCTTTCTAAGGGGTGAAAATGGAGAATTGAGATTGGGAATCAGAAGAGCTGTTCGACCTAGAAATGGTCTTCCTGAATCAATTATTGGCAATCAGAATTGTTATCCCAATTTTTTTTCACCTGTGGCTAATGCAATATCCACCAAAAGTATGTTTCATGTTTTCTACAGTCCAAGAGCGAGTCATGCAGAGTTTGTTGTGCCCTACCAAAAATACGTCAAAAGCATCAAGAATCCAGTGACCATTGGAACAAGATTCAAAATGAAGTTTGAGATGGATGAAGCTCCAGAAAGAAGGTGCAGTGCTGGTATTGTGACTGGGATTGGTGATTTGGATCCCTATCGATGGCCTAAATCAAAATGGAGGTGCTTGATGGTGAGATGGGATGAGGATATTTCTAGCAATCATCAAGAACGAGTTTCTCCATGGGAGATTGACCCTCGTGTTTCTATCCCTCCATTGAGCATCCAGTCTTCCCCAAGACTGAAGAAATTGCGGACCGCTCTGCAGGGTGCCCCCCCCAGCCCCTTCATCACTGGAGGCAATGGGTTTATGGACTCCGAGGAGTCTATGAGACCGCCCAAGGTCTTGCAAGGTCAAGAAAATACAGGTTTTGTGCCACTCTATTATGGATGTGACACAATAACCAACCGGCCAGATTTTGAGATGAATTCTACCAGTCATCAAAATCTTGCAGTAACTGGAATAAGAAATACTAGAGCTCAGGCTTACCCTTCTAGTTATGCAGGCTTAGCCGAAACTAATAGATTCCCGAGGGTCTTGCAAGGTCAAGAAATATGTCCATTGACACTGACAGGAAAGGTTGATTTTAACCTTGGTGCTTGTGCTTGGGGTAAACCCAATGTGACTTGTAAAGCTTTCAACATGCATCACCCACCCAAATCCGACTTTCACTCTTTAGGACCACAAGTCCTTCAAACTGCATATTTTCCTTATGGTGACATAAGCATCCACAAAGCCGGTCAAGGCAACATCTTGTGCTCAAAACCAAGTAATTTCCAGAGGGAGAATGTGCCATTTAACACGTGTTCCACTCAGAGAAATGAAGATCTTTCAGGTGAGCAGAAGCTGCAGGACAACATCTCTGCTGCTACTTTAGGGGGAAATATGATGATTTCAACTGAAGACAATTTCAAACGGAAGGTAGGTGGCAATGGCTGTAAACTATTTGGGTTTTCCTTGTCTGGGGAAAGTACAAGTCAGAATTCTGCAGCTAAAAGGAGTTGCACAAAGGTTCACAAGCAAGGCAGCTTAGTTGGAAGAGCAATTGACCTCTCAAGATTGAGCAGCTACAATGACCTGCTGAGTGAACTAGAGCGACTATTTGGCATGGAAGGCCTTCTAAGAGATCCTGATAAGGGGTGGAGAATCCTCTATACCGACAGTGAAAACGACATCATGGTTGTAGGGGATGACCCATGGCATGAATTTTGCAATGTTGCATCCAAGATCCATATATATACCCAAGAAGAAGTGGAGAAGATGACTATTGGGATGATCAGTGATGATACGCAGAGCTGTTTGGAGCAGGCACCACTGATAATGGAAGCTTCAAAGTCTTCTTCGGTGGGGCAACCAGATTCTTCTCCTACAGTAGTCAGGGTCTAAGTTTCTATGCAATTTACTCCACGTCTTATATAATATTATTCTTGTTATATTAATAGATCTCCTATTGCATTGCCAGAGCAACGAAGA 2492 0.4454 MEIDLNHAVSEVENNALLCNGECEKGACVCCLSSSTCSSSSYLELWHACAGPLTSLPKKGNAVVYFPQGHLEQVASFSPISPMEIPTYDLQPQIFCKVVNVQLLANKENDEVYTQVTLLPQAELAGSHSEGKELEELGVDEEGNGGSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNGLPESIIGNQNCYPNFFSPVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSIKNPVTIGTRFKMKFEMDEAPERRCSAGIVTGIGDLDPYRWPKSKWRCLMVRWDEDISSNHQERVSPWEIDPRVSIPPLSIQSSPRLKKLRTALQGAPPSPFITGGNGFMDSEESMRPPKVLQGQENTGFVPLYYGCDTITNRPDFEMNSTSHQNLAVTGIRNTRAQAYPSSYAGLAETNRFPRVLQGQEICPLTLTGKVDFNLGACAWGKPNVTCKAFNMHHPPKSDFHSLGPQVLQTAYFPYGDISIHKAGQGNILCSKPSNFQRENVPFNTCSTQRNEDLSGEQKLQDNISAATLGGNMMISTEDNFKRKVGGNGCKLFGFSLSGESTSQNSAAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLLSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEFCNVASKIHIYTQEEVEKMTIGMISDDTQSCLEQAPLIMEASKSSSVGQPDSSPTVVRV 782
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00172 782 Gene3D - 320 392 - -
Bach9g00172 782 SUPERFAMILY DNA-binding pseudobarrel domain 148 264 IPR015300 -
Bach9g00172 782 FunFam Auxin response factor 319 392 - -
Bach9g00172 782 Pfam B3 DNA binding domain 156 257 IPR003340 GO:0003677
Bach9g00172 782 ProSiteProfiles B3 DNA-binding domain profile. 156 258 IPR003340 GO:0003677
Bach9g00172 782 ProSiteProfiles PB1 domain profile. 654 738 IPR000270 GO:0005515
Bach9g00172 782 CDD B3_DNA 154 256 IPR003340 GO:0003677
Bach9g00172 782 Gene3D - 154 258 IPR015300 -
Bach9g00172 782 SUPERFAMILY CAD & PB1 domains 647 733 - -
Bach9g00172 782 Gene3D - 649 743 - -
Bach9g00172 782 SMART B3_2 156 258 IPR003340 GO:0003677
Bach9g00172 782 FunFam Auxin response factor 154 258 - -
Bach9g00172 782 Pfam Auxin response factor 282 364 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bach9g00172 782 FunFam Auxin response factor 649 743 - -
Bach9g00172 782 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 41 743 IPR044835 GO:0003677|GO:0006355|GO:0009725
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00172 Bach-Chr9 1206742 1210635 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00172 38 782 B3 DNA Binding Superfamily AT5G60450 61.987 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bach9g00172 AUX_IAA 1.1e-06 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00172 - - gmx:100812909 1236.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01301 13 17224055 17228278 Bach9g00172 9 1206742 1210635 BWGD