Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00129 ATGTCTTCTACTACGGCGGTGCGACAGGAATCTTGGGAGTGGAAGTCCCAAGAGGTGGCCTCAGTTATTGTAGTCTGCATCGTGTTCCTTATACTGAGTTATTACAGCGTACTTAAGCGTCTCTTCCATACTGCAAATTCCCACAGAAACCAAGGTCCAAGACGACTTCTGGATGAGTCTATTGCAGATGATCCTTCTTTACAGTTTCAAAGTTATGGGTTGGAAGTCTCTACTCTACACTCTCTTCCTATGTCTCAATTCAAGAAAAGTGAAGCAGAAGATAAGGCGACTAACACAGACTGCGCAATTTGCCTGGGTGAGTTTGAAGAAGAGGAATGGCTAAAACATCTTCCTAATTGCAACCATGTTTTCCATGTTTCCTGCATTGACACTTGGTTTCAGTCTCACTCAAGTTGCCCTCTTTGCAGATCTCAAGTCCATTGTCACCTCACGGTTAACTAG 462 0.4394 MSSTTAVRQESWEWKSQEVASVIVVCIVFLILSYYSVLKRLFHTANSHRNQGPRRLLDESIADDPSLQFQSYGLEVSTLHSLPMSQFKKSEAEDKATNTDCAICLGEFEEEEWLKHLPNCNHVFHVSCIDTWFQSHSSCPLCRSQVHCHLTVN 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00129 153 PANTHER RING-H2 FINGER PROTEIN ATL16 16 149 IPR044600 GO:0016567|GO:0016740
Bach9g00129 153 CDD RING-H2_EL5-like 100 143 - -
Bach9g00129 153 SMART ring_2 101 142 IPR001841 -
Bach9g00129 153 FunFam E3 ubiquitin-protein ligase ATL6 63 149 - -
Bach9g00129 153 SUPERFAMILY RING/U-box 93 148 - -
Bach9g00129 153 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
Bach9g00129 153 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 62 149 IPR013083 -
Bach9g00129 153 Pfam Ring finger domain 100 143 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00129 Bach-Chr9 890634 891095 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00129 19 149 C3H Transcription Factor Family AT1G04360 35.252 6.14e-24 94.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00129 - - aprc:113859782 192.586