Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00126 ATGGTTCAACAGGAAATCCGTAAAGGTCCATGGACAGAACACGAGGACGTCAAACTGGTCAACTTTGTTGGCTTGTTTGGTGACCGGAGATGGGATTTTATAGCCAAAGTTTCAGGTTTGAAGGTGGCGGGAGAAGGTTTGAATAGAACAGGTAAGAGTTGCAGGTTACGATGGGTTAATTACTTGCATCCTGGTCTCAAACGAGGGAAGATGACACCCCAAGAAGAGCGCCTTGTGCTGGAACTTCACCAAAAATGGGGAAATAGATGGTCAAGAATTGCTCATAAATTACCAGGGCGCACAGACAATGAGATTAAGAATTACTGGAGAACTCACATGAGGAAGAAGGCTCAGGAGAAAAAGCAAACACAAGCAGTCACTCCATCATCAACATCCTCTAGTTGTAATTCCTCGTTCTCATCAAAAAGCCATAGAGTCGATTCATATCCTTCCAAAAAGACTGGAGAAGAAAGCTTTTATGACACAGGAGGGGCCAATATGACTGCTCCCATAGGAGTGATGATAGGAGAAGAGAAACAAAGTGAACAGGGCTACTCCATGGATGATATATGGAAAGATATCGATATCTTAGAAGAGAACATTCTACTGCCAGCATATGATGGGCGTAGTGGAGACGGCTGCAACATCTCTTGTCTTCCCATGCCTTCTCCATCATGGGAATATTCTTCAGACACGCTATGGGCGAAGGATGAAGAAGAAATGTTTTTACTTTCAGCAGAAAAGGGGAATCTCAAGAAACCTCTAGTAGGAAGGTTGTATGTTCTAAATGTGATATATTAA 801 0.4295 MVQQEIRKGPWTEHEDVKLVNFVGLFGDRRWDFIAKVSGLKVAGEGLNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHQKWGNRWSRIAHKLPGRTDNEIKNYWRTHMRKKAQEKKQTQAVTPSSTSSSCNSSFSSKSHRVDSYPSKKTGEESFYDTGGANMTAPIGVMIGEEKQSEQGYSMDDIWKDIDILEENILLPAYDGRSGDGCNISCLPMPSPSWEYSSDTLWAKDEEEMFLLSAEKGNLKKPLVGRLYVLNVIY 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00126 266 SMART sant 67 115 IPR001005 -
Bach9g00126 266 SMART sant 7 64 IPR001005 -
Bach9g00126 266 CDD SANT 10 62 IPR001005 -
Bach9g00126 266 ProSiteProfiles Myb-like domain profile. 3 62 IPR001005 -
Bach9g00126 266 Pfam Myb-like DNA-binding domain 8 62 IPR001005 -
Bach9g00126 266 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Bach9g00126 266 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Bach9g00126 266 Gene3D - 8 67 - -
Bach9g00126 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 3 62 IPR017930 -
Bach9g00126 266 PANTHER MYB TRANSCRIPTION FACTOR-RELATED-RELATED 3 124 IPR044676 GO:0003700|GO:0006355|GO:0043565
Bach9g00126 266 MobiDBLite consensus disorder prediction 114 161 - -
Bach9g00126 266 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Bach9g00126 266 Gene3D - 70 143 - -
Bach9g00126 266 SUPERFAMILY Homeodomain-like 5 109 IPR009057 -
Bach9g00126 266 CDD SANT 70 113 IPR001005 -
Bach9g00126 266 MobiDBLite consensus disorder prediction 122 145 - -
Bach9g00126 266 FunFam MYB transcription factor 70 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00126 Bach-Chr9 872855 874082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00126 1 250 MYB Transcription Factor Family AT5G59780 55.556 7.89e-85 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach9g00126 Myb_DNA-binding 5.3e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00126 K09422 - qsa:O6P43_000247 355.525