Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00124 ATGCTGAGGCAGTTTCAGACGCCATCTCTTTCCCTTGTTGACAGAACTTTAGCAATGAAGAGAAGCAGAGACGACAGTGAGGTAGAGAGCTTAGACATGGCTGATTGTTTGATGTTACTATCCAACGTTGGCGAAACCAAGCCATCGAGAGAGTTGAAGAGTCATGGTGGAGGTTTTAAGTGCAAAACTTGTAATAGGCAGTTCCCTTCTTTTCAAGCCCTTGGTGGCCATAGGGCGAGCCACAAGAAACCCAAGCTCATGGGGAGAGGAGACCTTTTGCCAAACTCGCTAGTGAAGCCAAAGATGCACGAGTGTCCTATTTGTGGTGTTGAATTTGCGATTGGTCAAGCTCTAGGAGGGCACATGAGGAAGCACAGGGCTGAACTTCATGAAGGTTTGGTGAGTCATGCCGTCAAGAACTCTAAGCCGGTGTTGAAGAAATCGACTAGTAGGAAGATTTTGTGCTTGGATTTGAACTTAACGCCCTTTGAGAATGATCTGAAGCTCAACTTAAGGACACCGGTGCTTAATTGTCTCTTTTAA 543 0.4604 MLRQFQTPSLSLVDRTLAMKRSRDDSEVESLDMADCLMLLSNVGETKPSRELKSHGGGFKCKTCNRQFPSFQALGGHRASHKKPKLMGRGDLLPNSLVKPKMHECPICGVEFAIGQALGGHMRKHRAELHEGLVSHAVKNSKPVLKKSTSRKILCLDLNLTPFENDLKLNLRTPVLNCLF 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00124 180 SUPERFAMILY beta-beta-alpha zinc fingers 59 125 IPR036236 -
Bach9g00124 180 Pfam C2H2-type zinc finger 103 128 - -
Bach9g00124 180 Pfam C2H2-type zinc finger 59 84 - -
Bach9g00124 180 ProSitePatterns Zinc finger C2H2 type domain signature. 105 125 IPR013087 -
Bach9g00124 180 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 86 IPR013087 -
Bach9g00124 180 ProSiteProfiles Zinc finger C2H2 type domain profile. 103 130 IPR013087 -
Bach9g00124 180 SMART c2h2final6 59 81 IPR013087 -
Bach9g00124 180 SMART c2h2final6 103 125 IPR013087 -
Bach9g00124 180 ProSitePatterns Zinc finger C2H2 type domain signature. 61 81 IPR013087 -
Bach9g00124 180 Gene3D Classic Zinc Finger 56 125 - -
Bach9g00124 180 PANTHER ZINC FINGER PROTEIN ZAT5 19 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00124 Bach-Chr9 846784 847326 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00124 19 171 C2H2 Transcription Factor Family AT2G28710 51.572 1.15e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach9g00124 zf-C2H2_6 1.1e-09 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00124 - - qsu:112033021 193.741