Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00119 CAACTTTCCTCTCTTCATTCACAAATCCTTCTCTGTATTTTCTCCGTCGCTTTCTTTCTCTTTGTTGGAGGCAAAAGGTGAATAACCATGTCTGCATCTCTGGATATGTCCCTGGATGACATCATTAAGAGCAATAAGAAGTCTGGATCCGGAAACTACAGGGGTCGTGGCCGAGGATCCGGACCGGGTCCCGCTCGCCGCTTCTCCAACCGTGCTGTCAATCGTTCAGCGCCTTATCCCACAGCTAAGGCACCGGATACGACATGGCAGCACGATATGTTTACAGATCAGCCGGCGGCAGCGTTCCCAGCACAAGGCGGTCGAGCGTCTTCCATAGAAACGGGGACCAAACTCTACATATCTAATTTGGATTATGGTGTTTTGAACGAGGATATTAAGGAATTGTTTTCTGAAGTTGGTGACCTGAAACGGTACACAATTCACTATGACAGGAGTGGGAGATCAAAGGGTACAGCAGAAGTAGTCTTCATGCGACGAGCAGATGCTGTAGCTGCTGTAAAGAGATACAACAATGTCCAACTTGATGGGAAAGCAATGAAGATTGAGATTGTGGGAACAAACATCGCTACACCTACAGTGGCTCCTGTTATAAATGGAGCTATTGGAAATCCTAATGGAATTCCAAAGAGTGGACAAGGGAGAGGTGGGCCAATGGGAAGACAGCGTGTTGGAGGAGGTAGAGGGCATGGGATACAAAGGGGCGGTCGAGGACGTGGGAGAGGTCGTGGTGAAAAGCGATCTGCAGAAGATCTCGATGCTGATTTGGATAAATATCATTCAGAGGCAGTGCAAGAGAACTGAAGGCATCTCCCATGCTCTATTTTCTTGCTGTTGCATCTGTGGTTGTTAGGAGCATGGTGATGTAACGCTGGGTATTTATATATCTTATTCACAGCCCTACTTTTTAGGGTTAAGGGGAATGGTTGCTTCTTGAGTGAAATCTGTTAAGACTTGATATATGGAGTTTGGGCTTCTCTTGGCAAATATTTTATCCTTGGGTGTTAAATCTGGGTTAGCAAACAGAAGTCATCTTGTTGTCTCACTCGAAGTTTGCATTCAATGGCTTTGATCTTTCTTATGTTTTATTCAAGAAGTGGGTATGGAAGTGGGAAGTACGATCTCCTTTGTCCATGCACAAAGAAAGCACTGGCTGCACTATGTGGGAGGCTGCAGGATTCACCCACAGCTACTTTGTGTTTTGGTTACAGCGGAATCTTCAAATAAGGTAGATTGCCATCCCCTTCCTACCTGTATTGTCCTCCGTACCCCCTAAAAAGAGTTGATTGTGGATCTTTCGTTGTTATAATTTTGCCCTGTTCTATGATTGTCTAATTGATATAACCTAATCAGGTCTTTTATTATAATCTTGAGATTGCGTTGGTCACATATTGTTCTAGGAGAATGTTTTCCCGTTGACAGTTTGGTAATTTTGGCGTTTCATCTAGTAAAATGGAATCTCTGATCTGTTCAACTCTAC 1498 0.4439 MSASLDMSLDDIIKSNKKSGSGNYRGRGRGSGPGPARRFSNRAVNRSAPYPTAKAPDTTWQHDMFTDQPAAAFPAQGGRASSIETGTKLYISNLDYGVLNEDIKELFSEVGDLKRYTIHYDRSGRSKGTAEVVFMRRADAVAAVKRYNNVQLDGKAMKIEIVGTNIATPTVAPVINGAIGNPNGIPKSGQGRGGPMGRQRVGGGRGHGIQRGGRGRGRGRGEKRSAEDLDADLDKYHSEAVQEN 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00119 244 MobiDBLite consensus disorder prediction 14 58 - -
Bach9g00119 244 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 87 164 IPR000504 GO:0003723
Bach9g00119 244 MobiDBLite consensus disorder prediction 215 244 - -
Bach9g00119 244 SMART FoP_duplication_2 175 244 IPR025715 -
Bach9g00119 244 SMART rrm1_1 88 160 IPR000504 GO:0003723
Bach9g00119 244 CDD RRM_THOC4 87 161 - -
Bach9g00119 244 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 89 157 IPR000504 GO:0003723
Bach9g00119 244 Gene3D - 74 230 IPR012677 -
Bach9g00119 244 SUPERFAMILY RNA-binding domain, RBD 17 161 IPR035979 GO:0003676
Bach9g00119 244 MobiDBLite consensus disorder prediction 182 244 - -
Bach9g00119 244 Pfam C-terminal duplication domain of Friend of PRMT1 188 240 IPR025715 -
Bach9g00119 244 FunFam THO complex subunit 4 80 231 - -
Bach9g00119 244 PANTHER RNA AND EXPORT FACTOR BINDING PROTEIN 5 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00119 Bach-Chr9 817877 821368 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00119 86 161 Eukaryotic Initiation Factors Gene Family AT2G23350 32.895 2.18e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00119 K12881 - qsa:O6P43_028263 327.405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01361 13 17717268 17719792 Bach9g00119 9 817877 821368 BWGD