Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00107 ATGGAGGATGAAAGGGGAGCCATAGTACAGAACTTGATTGACTTGGTGAATGAGATAGCTGTGATCTCAGATTATAGATGTACAGTAAAGAAGCAATGCTGCAATTTGGCCAGAAGACTTAAGCTCTTGACTCCAATGTTTGAAGAGATTAGAGACAGCAGAGAGGCCCTCCCTCAAGATACTTTAAAAGCTTTCGTTTCCTTGAAGGAGGCTCTAGAATCGGCCAAGCAGCTTCTCAGATTTGGGAGTGAGGGAAGCAAGATTTACATGGTTCTAGAGAGAGACCAAATTATGAATAAATTCCACGAGGTGACAGCCCAGTTGGAACAAGTTCTGAGTGGAATTTCCTACGATAAACTAGACATATCCGATGAAGTTAAGGAGCAGGTTGAGCTTGTTCTTGCCCAGTTCAGAAGAGCCAAAGGAAGGGCTGACACACTGGATGTTGGGTTGCATGAGGATCTTGTATCTCTTTACAACAAGAGCAATGATGCAGCTTCAGATCCGGCTGTTCTAAGGAGATTAGCTGAAAAATTGCAATTGATGGTGATATCTGATCTCACACATGAGTCACTAGCTTTGCATGAGATGGTGACAGCAAGTGGTGGGGATCCAGGTTCAAGCATTGAGAAGATGTCAATGCTGTTGAAGAAAATAAAGGATTATGTGCAAACTGAAAATCTAGTCATGGACGATACTGTCGGAGGAAAAGGGATTTCATCAAGTTTCAGCAAACAAGGGACAAATGAAAAAAATCATCAGCCCCCTGTTATCCCTGATGATTTTCGATGTCCAATATCCCTAGAATTGATGAAAGACCCTATCATTGTTTCAACAGGACAGACCTATGAGCGATCTTGTATAGAAAAGTGGTTGGAGGATGGGCATGGGACATGTCCGAAAACACAGCAGACGCTCACTAGTACTGTTTTGACACCCAATTATGTGTTAAGGAGCCTCATAGCTCAATGGTGTGAAGCCAATGGCATAGAACCACCAAAACGGCCCAGCAGTTCTCGACCAAGTAGATCATCATCTTCTTGCTCACCTGCTGAGCGTAGCAAGATTGAAAATCTACTCCGCAGGCTTACATCTGGGAATCCTGAAGACCAGAGATCAGCTGCAGGTGAGATCCGCCTTCTTGCTAAGCGCAATGCAGATAATCGTGTAGCCATTGCTGAAGCTGGTGCAATCCCTCTCCTAGTTGGCCTCCTCTCAACATCTGACTCCCGCACCCAAGAACATGCTGTGACAGCACTTCTGAATCTTTCTATATGTGAGAATAACAAAGGAAGTATTATATCTTCTGGGGCTGTTCCTGGTATAGTTCATGTGCTCAAGAAGGGCTGTATGGAAGCTCGGGAAAATGCAGCAGCAACACTGTTCAGCCTTTCAGTCATAGATGAAAATAAGGTTACAATTGGTTCTTCAGGAGCCATCCCACCACTAGTGACACTGCTGAGTGAGGGTACTCAAAGGGGTAAGAAAGATGCTGCGACAGCACTCTTCAATTTGTGCATTTACCAGGGTAACAAAGGAAAGGCAGTGAGGGCTGGGGTTGTTCCCACACTGATGCGACTGCTGACAGAACCTGGGGGTGGAATGGTGGATGAAGCAATGGCCATTTTGGCAATATTGGCTAGCCATCCTGAGGGGAAGGTTGCGATTGGTGCTGCAGAAGCAGTGCCAATATTAGTAGAGGTTATTGGAAATGGATCCCCACGGAACAAAGAGAATGCAGCTGCAGTTTTAGTGCACCTTTGTTCTGGAGATCAACAATTTCTAGCACAAGCCCAAGAGCTAGGTGTGATGGCTCCATTGTTGGATATGGCTCACAATGGCACGGACAGAGGAAAAAGAAAGGCCACACAATTACTAGAGCGTTTAAGCAGGTTCAATGAGCAGCAGCAGCAGCAACAGGAGGAAGTTCAAACACAAACTGAACTTGAAACTCTCAACCTGGATGCACGATCACCTTCTATTACTAACAATGTTGATAGCTGA 2004 0.4511 MEDERGAIVQNLIDLVNEIAVISDYRCTVKKQCCNLARRLKLLTPMFEEIRDSREALPQDTLKAFVSLKEALESAKQLLRFGSEGSKIYMVLERDQIMNKFHEVTAQLEQVLSGISYDKLDISDEVKEQVELVLAQFRRAKGRADTLDVGLHEDLVSLYNKSNDAASDPAVLRRLAEKLQLMVISDLTHESLALHEMVTASGGDPGSSIEKMSMLLKKIKDYVQTENLVMDDTVGGKGISSSFSKQGTNEKNHQPPVIPDDFRCPISLELMKDPIIVSTGQTYERSCIEKWLEDGHGTCPKTQQTLTSTVLTPNYVLRSLIAQWCEANGIEPPKRPSSSRPSRSSSSCSPAERSKIENLLRRLTSGNPEDQRSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTSDSRTQEHAVTALLNLSICENNKGSIISSGAVPGIVHVLKKGCMEARENAAATLFSLSVIDENKVTIGSSGAIPPLVTLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPTLMRLLTEPGGGMVDEAMAILAILASHPEGKVAIGAAEAVPILVEVIGNGSPRNKENAAAVLVHLCSGDQQFLAQAQELGVMAPLLDMAHNGTDRGKRKATQLLERLSRFNEQQQQQQEEVQTQTELETLNLDARSPSITNNVDS 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00107 667 MobiDBLite consensus disorder prediction 633 667 - -
Bach9g00107 667 SUPERFAMILY RING/U-box 246 334 - -
Bach9g00107 667 PANTHER U BOX DOMAIN-CONTAINING 30 630 - -
Bach9g00107 667 FunFam RING-type E3 ubiquitin transferase 341 492 - -
Bach9g00107 667 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 519 561 IPR000225 GO:0005515
Bach9g00107 667 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 396 438 IPR000225 GO:0005515
Bach9g00107 667 ProSiteProfiles U-box domain profile. 257 331 IPR003613 GO:0004842|GO:0016567
Bach9g00107 667 MobiDBLite consensus disorder prediction 335 353 - -
Bach9g00107 667 MobiDBLite consensus disorder prediction 331 354 - -
Bach9g00107 667 FunFam RING-type E3 ubiquitin transferase 5 118 - -
Bach9g00107 667 CDD RING-Ubox_PUB 259 311 IPR045210 -
Bach9g00107 667 Gene3D - 535 652 IPR011989 -
Bach9g00107 667 Gene3D - 7 118 IPR036537 GO:0007166
Bach9g00107 667 SUPERFAMILY ARM repeat 356 640 IPR016024 -
Bach9g00107 667 FunFam RING-type E3 ubiquitin transferase 532 650 - -
Bach9g00107 667 CDD MLKL_NTD 30 138 - -
Bach9g00107 667 Gene3D - 350 534 IPR011989 -
Bach9g00107 667 SMART arm_5 467 507 IPR000225 GO:0005515
Bach9g00107 667 SMART arm_5 385 425 IPR000225 GO:0005515
Bach9g00107 667 SMART arm_5 549 589 IPR000225 GO:0005515
Bach9g00107 667 SMART arm_5 508 548 IPR000225 GO:0005515
Bach9g00107 667 SMART arm_5 591 631 IPR000225 GO:0005515
Bach9g00107 667 SMART arm_5 426 466 IPR000225 GO:0005515
Bach9g00107 667 Pfam Armadillo/beta-catenin-like repeat 550 589 IPR000225 GO:0005515
Bach9g00107 667 Pfam Armadillo/beta-catenin-like repeat 468 506 IPR000225 GO:0005515
Bach9g00107 667 Pfam Armadillo/beta-catenin-like repeat 385 424 IPR000225 GO:0005515
Bach9g00107 667 FunFam RING-type E3 ubiquitin transferase 258 331 - -
Bach9g00107 667 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 240 332 IPR013083 -
Bach9g00107 667 Pfam U-box domain 258 328 IPR003613 GO:0004842|GO:0016567
Bach9g00107 667 Coils Coil 619 649 - -
Bach9g00107 667 SMART Ubox_2 261 324 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00107 Bach-Chr9 736253 739748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00107 1 638 U-box Gene Family AT3G46510 72.300 0.0 939
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00107 - - qsa:O6P43_000217 1037.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach9g00107 9 736253 739748 Bach9g00107 9 736253 739748 ECH