Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00056 ATGAGAAAGCCAGAGCCCTCCGTGAAAAACAACAACATCAAGCTTAGGAAGGGGTTGTGGTCACCTGAAGAAGATGACAAACTCATGAACTACATGCTAAACAATGGACAAGGTTGTTGGAGTGACGTGGCCAGAAATGCTGGCTTGCAAAGGTGTGGCAAAAGTTGTCGGCTTCGATGGATCAATTACTTGAGGCCTGATCTCAAACGAGGCGCATTCTCACCCCAAGAAGAAGAACTCATCATCCATTTGCATTCCCTTCTCGGCAACAGATGGTCTCAAATAGCGGCGCGCTTGCCCGGCCGAACTGACAATGAAATCAAGAATTTCTGGAATTCAACAATAAAGAAAAGGCTCAAGAACTTATCATCCACAAACACAACCTCACCAAACGCAAGCGAGTCTTCAATATCTGAGCCTAAGGACCTGAACATGGGAAGGTTTATTTCTACGCACGATCACCAAAACGGCTTTATACCTGTGTTTAATAATCCATCTTCACCATCAATGCAAGCCACAGTTCTGACTAACATAATTGACAGATTGCCGATGCTCGAACATGGACTAAACATGCCAGCTGCAGGTGGGTTCTTCAATGGCACAGGACCATGCTTTACACAAAGTGGAGTTGATGACAATGGCTTCTATTTACAAAATGGAGTGTTGGGAAGTGTAAATATTGGACCGCAAGGGGACCTGCTCATTCCTCCTTTAGAGAGTGTTAACTCTGCTACTGATAACCTGAAAGTGGAGATTACGTGCAATAGGGATACTAACAATAGTTACTTTCATGACATAAACAGTATCGTTAATAACAATCACAGAGCTGAAAATAGAGGTGGGGTGGGGAATCTGTTTCAAGAGGAGTTAACAGTGGGAGAATGGGACTTGGAGGATTTGATGAAAGATGTTTCTTCCTTTCCATGTCTTGATTTTTCAAGCTGA 945 0.4349 MRKPEPSVKNNNIKLRKGLWSPEEDDKLMNYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIIHLHSLLGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKNLSSTNTTSPNASESSISEPKDLNMGRFISTHDHQNGFIPVFNNPSSPSMQATVLTNIIDRLPMLEHGLNMPAAGGFFNGTGPCFTQSGVDDNGFYLQNGVLGSVNIGPQGDLLIPPLESVNSATDNLKVEITCNRDTNNSYFHDINSIVNNNHRAENRGGVGNLFQEELTVGEWDLEDLMKDVSSFPCLDFSS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00056 314 CDD SANT 72 112 IPR001005 -
Bach9g00056 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 65 119 IPR017930 -
Bach9g00056 314 FunFam MYB transcription factor 14 70 - -
Bach9g00056 314 SUPERFAMILY Homeodomain-like 15 111 IPR009057 -
Bach9g00056 314 FunFam Transcription factor MYB46 71 143 - -
Bach9g00056 314 Pfam Myb-like DNA-binding domain 70 113 IPR001005 -
Bach9g00056 314 Pfam Myb-like DNA-binding domain 17 64 IPR001005 -
Bach9g00056 314 PANTHER MYB DOMAIN PROTEIN 55 10 147 - -
Bach9g00056 314 Gene3D - 71 143 - -
Bach9g00056 314 Gene3D - 14 70 - -
Bach9g00056 314 SMART sant 69 117 IPR001005 -
Bach9g00056 314 SMART sant 16 66 IPR001005 -
Bach9g00056 314 ProSiteProfiles Myb-like domain profile. 12 64 IPR001005 -
Bach9g00056 314 ProSiteProfiles Myb-like domain profile. 65 115 IPR001005 -
Bach9g00056 314 CDD SANT 20 64 IPR001005 -
Bach9g00056 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 12 64 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00056 Bach-Chr9 415984 417626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00056 1 307 MYB Transcription Factor Family AT5G12870 47.531 6.65e-75 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bach9g00056 Myb_DNA-binding 3.6e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00056 K09422 - gmx:100786151 471.085