Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00053 ATGTCCTCCCAGCCCCAGGGATATCATCATCCTTCATCCATTGAGGAAGTCCGAACCCTTTGGATTGGGGATTTGCAGTACTCGGTTGACGAAGCCTACCTTAATCACTGCTTTGCTCACACCGGCGAGGTAGTTTCCATAAAGATTATACGGAACAAGATCACTGGACAACCCGAGGGCTATGGGTTTGTGGAGTTTGTTTCACATGCAGCAGCAGAAAGGATTCTGCAGACTTACAATGGGACTCAAATGCCAGGAACGGAACAAACTTTCAGGCTGAATTGGGCTTCTTTTGGTATTGGGGAACGGCGTCCTGATGCTGGGCCTGAGAACTCAATTTTTGTGGGGGATTTGGCACCTGATGTAACAGATTACCTATTGCAGGAGACATTTCGAGCCCATTATCCTTCAGTTAGAGGCGCCAAAGTTGTGACTGATCCTAATACAGGGCGCTCCAACGGATGTGGGTTTGTTAAATTTTTTGATGAGGCAGAAAGAACCGTTCTATGA 510 0.4725 MSSQPQGYHHPSSIEEVRTLWIGDLQYSVDEAYLNHCFAHTGEVVSIKIIRNKITGQPEGYGFVEFVSHAAAERILQTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPENSIFVGDLAPDVTDYLLQETFRAHYPSVRGAKVVTDPNTGRSNGCGFVKFFDEAERTVL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00053 169 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 20 88 IPR000504 GO:0003723
Bach9g00053 169 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 113 164 IPR000504 GO:0003723
Bach9g00053 169 CDD RRM1_SECp43_like 19 99 - -
Bach9g00053 169 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 111 169 IPR000504 GO:0003723
Bach9g00053 169 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 11 167 - -
Bach9g00053 169 Gene3D - 100 167 IPR012677 -
Bach9g00053 169 SMART rrm1_1 19 94 IPR000504 GO:0003723
Bach9g00053 169 SMART rrm1_1 112 169 IPR000504 GO:0003723
Bach9g00053 169 SUPERFAMILY RNA-binding domain, RBD 17 163 IPR035979 GO:0003676
Bach9g00053 169 Gene3D - 17 97 IPR012677 -
Bach9g00053 169 FunFam Polyadenylate-binding protein RBP47B 17 97 - -
Bach9g00053 169 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 18 98 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00053 Bach-Chr9 402433 403427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00053 20 168 Eukaryotic Initiation Factors Gene Family AT1G49760 27.778 1.67e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00053 - - mof:131147919 308.531