Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00050 AGAGTAGAAAGACCAGAAAAGAGACCCATTTTATGTTTCTATTATTCCTCTCTGTGCTCTAAGGGAGCTACTCGTATTTTCTCTCCCACTGCAATTAATCGTCGATCATGTTAAGGTATGATTGAGGTATCTGACTAATCTGACTTGCGATTATCATTCATACCCTGCGATGAGGAAATTTTTATACTCTTGTTGAGCCTTCCCATTTTCACTCTGCTCTTTTATGCAGTTCATAAATCCTCGAATATAGCTAGGACCGATTGCTAATTGACGTGTTTTGAATATACAATATACAAAGGATTGGGCTTTTCCATTTTCTAGTGGTAATACGTTTCACTTTCCGTTCTAACCTTCCGTAATCAGCACCCAAAATCTACAGTTAGGGTTTAGAGGTTTTGTTGTAATAATGAATAATTCAAGTTTGGGAGGTGGGTTTTTGTCGGGTCCCAGTGGGGGTATATTGGACCTGGAATCGCCATTTCATCGACACCAAACGACCCAGTTGGGTCATCCTTCGGTAACGAGTCAGCACCACGTTAATATGATATGTGGTCTGGAAAGTGATCACCACCCAATTGGGCTAATGGAAGTGAAAGGCTCTAATGCGACATTGAATTTTGGTAAGGGAAAGGCAATTGCTCCTTCTAATCTCACCAACAATAATGATCCGAGTGAAGAGGATGAGCCAAGTTATGCAGAAGATGGAAATTGTGAGAACTTCGATGGTGGTAAGAGCCAAAAGGGGTCTCCTTGGCAGCGAATGAAGTGGACAGATAATGTGGTAAGGCTTCTTATTGGAGTGGTGGCTTGCGTGGGAGAGGATGGTACAATCGATGGCATGGATGGTCTTCAAAGGAAATTTGGAATTTCGCAGAAGAAGGGTAAGTGGAAAACGGTTTCCAAGATAATGATAAGCAAAGGCTGCCATGTTTCACCGCAGCAGTGTGAGGATAAGTTTAATGATTTAAATAAGAGGTACAAAAGGTTAAACGATATACTTGGAAGGGGAACTAGTTGTAGAGTGTTTGAGAATCCCGCATTGTTGGATTCTATGCCCAACCTGTCAGCTAAGGCGAAGGATGGCGTCAGAAAGATTTTGAGCTCTAAACACTTGTTTTATAAGGAGATGTGTGCCTACCATAATGGGCAAAGGATACCAAATTGCCATGATCTTAATTTACAAGGTTGTTCTGTGCAACATGGGAGGGACTCAAGGGATGATAATGGCTCAGAGGAGGAAGCTGAGGAAAACATTAATGAAAGTGAGGATGATGAGTTGGGTACTGAAGGTAATAATAACGGTCATGGGGAGGGGATGGAGTTCTGTGAAAGAAAGAAATTAAGTGAAGAGGATGGTCATTTCTGGCCGCAATCTTTTGGGCTGGATAAATTTGAAGCTGAAATGGCTAGGATTTTTCAAGACCCTACAAAGTCATTATGGGAACGAAGAGAGTGGCTTAAGATGCAGATGAGGCAGCTCCAAGAACAAAGCGTCAGTTACAAAGCTCAAGCTCTTGAACTTGAGAAACAACGTTTTAAGTGGCTAAGATACTGCAGCAAAAAGAATAAGGAGCTGGAGAGGTTGAGGTTGGAGAATGAGAGGATGATGTTGGAAAATGAGCGCAAGGTCTTGCAACTGAAGCAGAAGGAGGTTGAGACAGATTTCAGGAGGTCCGACATGTCCATGGACCCTCCTTCTCTAGGAATTGAGAGGGCTGCGAGCGAGGGATATCAACTTGGGCAGACAGCATTAGATTGTGTTCAACAACGATCATTCAGTCATCATTGCTTACATACATATTGCTTGCCTTACAGAAAATTCAAGATGAATTGGAACTCACACATGGAGGTTCATTACAATAACATTAGCTATCCCTATAATACAGCAGGAAGCTTTATCGAATATTTTGAAGGTCTTACCTATGAACATGTCAATTTCATTTTTTCTGGTGCTTCACATGCACAGGATAGTTTGTACCCTTCAACAACGACAAGTGCTTACAAGTTTGGACTATCTGAACCTGACAGTACTCCATACTATCAATATAGCCATCATTATGAGTTGAATCATCAAGAACTACATATGGATGACCACAGAAGGCCTTCAGAGAACTTGTCAACAATCAATGAGCAGATGGAAGCAGTAAGTACGGAATGGGGAGAAGGTGTTAACATTGCAACACAAGACAATTCTATTGAATGTCCACAAAGACATCACAATTCCCATGATTATCAGGTCATTAGGCAAGACAATATTGATCCTGACAACATGACTTATGAGGAATTACTTGAGTTAGGTGAAGCTGTTGGATCTCAAAGTCGTGGTCTCTCGCAAGAACAAATCGCTTTGCTTCCAACCTCAAAGTACAAGGGAGGGTTCTTCTTAAGGAAAAAATCACGTGACGAGAGATGTGTGATTTGCCAAATGGAGTATAAAAGGGGGGACAAACAGATAACGTTACCGTGCAAACATGCCTATCATGCTAGTTGCGGGACCAAATGGCTTAGCATCAATAAGGCTTGCCCTATATGTTACAGGGAGGTGTTTGCCGACACATCAAAACACAAATAA 2572 0.4168 MNNSSLGGGFLSGPSGGILDLESPFHRHQTTQLGHPSVTSQHHVNMICGLESDHHPIGLMEVKGSNATLNFGKGKAIAPSNLTNNNDPSEEDEPSYAEDGNCENFDGGKSQKGSPWQRMKWTDNVVRLLIGVVACVGEDGTIDGMDGLQRKFGISQKKGKWKTVSKIMISKGCHVSPQQCEDKFNDLNKRYKRLNDILGRGTSCRVFENPALLDSMPNLSAKAKDGVRKILSSKHLFYKEMCAYHNGQRIPNCHDLNLQGCSVQHGRDSRDDNGSEEEAEENINESEDDELGTEGNNNGHGEGMEFCERKKLSEEDGHFWPQSFGLDKFEAEMARIFQDPTKSLWERREWLKMQMRQLQEQSVSYKAQALELEKQRFKWLRYCSKKNKELERLRLENERMMLENERKVLQLKQKEVETDFRRSDMSMDPPSLGIERAASEGYQLGQTALDCVQQRSFSHHCLHTYCLPYRKFKMNWNSHMEVHYNNISYPYNTAGSFIEYFEGLTYEHVNFIFSGASHAQDSLYPSTTTSAYKFGLSEPDSTPYYQYSHHYELNHQELHMDDHRRPSENLSTINEQMEAVSTEWGEGVNIATQDNSIECPQRHHNSHDYQVIRQDNIDPDNMTYEELLELGEAVGSQSRGLSQEQIALLPTSKYKGGFFLRKKSRDERCVICQMEYKRGDKQITLPCKHAYHASCGTKWLSINKACPICYREVFADTSKHK 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00050 721 MobiDBLite consensus disorder prediction 76 116 - -
Bach9g00050 721 Coils Coil 355 375 - -
Bach9g00050 721 FunFam E3 ubiquitin ligase BIG BROTHER 631 714 - -
Bach9g00050 721 Gene3D - 121 193 - -
Bach9g00050 721 MobiDBLite consensus disorder prediction 264 304 - -
Bach9g00050 721 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 631 715 IPR013083 -
Bach9g00050 721 PANTHER F16F4.11 PROTEIN-RELATED 1 422 - -
Bach9g00050 721 Pfam Ring finger domain 668 709 IPR001841 -
Bach9g00050 721 SUPERFAMILY RING/U-box 665 716 - -
Bach9g00050 721 Pfam Myb/SANT-like DNA-binding domain 118 209 IPR044822 -
Bach9g00050 721 ProSiteProfiles Zinc finger RING-type profile. 669 709 IPR001841 -
Bach9g00050 721 Coils Coil 383 419 - -
Bach9g00050 721 SMART ring_2 669 709 IPR001841 -
Bach9g00050 721 MobiDBLite consensus disorder prediction 274 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00050 Bach-Chr9 383224 391210 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00050 481 720 C3H Transcription Factor Family AT3G63530 43.265 1.76e-60 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bach9g00050 Myb_DNA-bind_4 1.8e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00050 - - gmx:100798932 648.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bach13g01425 13 18130572 18133658 Bach9g00050 9 383224 391210 BWGD