Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bach9g00048 GTTTCCACATCTCATCATGACTAATCCCTTCTACTCCAATAACTTCAATGGTTGCTTTGACCTCAATTCTCCTTGCCTTTTCTCTAGTTCATCATCTTGCTCCAATCCACCATTCTCTTTTCCTTCTACTTATCGTAATTTGGCATGTGGCATCTCTGTTACTCAGTGCCAACCCTCACCCCCCTCTCCTCCTCTAAGAGAAGCTCTTCCTCTCCTTAACCTAAGCCCCATAAGACATGAAGACCCTGAATCTTTTTTTACTACCATGGAAGTGGACAACAACGAGAAAGAAGCAATTATCTCTTCTAGCTCCATGGAAGATGAAAATGTGACAGTGGCTTTACATTTAGGGCTTCCGACCATAAGTTCAACTGATTTAGCTTCAAACATAGACTCCACTGAGGTTGCAGATAAAGACGAAGTCACTGTTGCTTCTGAGTATCCGCCCAACAGAATTAACAGAGGTCAGTATTGGATCCCTACACCAGCTCAGATCCTGATTGGTCCAACACAGTTTTCATGCCCTCTTTGTTTCAAGACCTTCAACAGATACAACAACATGCAGATGCATATGTGGGGTCATGGATCTCAATATAGAAAAGGACCAGAGTCTCTAAGGGGAACACAACCAACAGCTATGCTTAGGCTACCCTGCTATTGCTGTGCACCAGGATGCAAGAATAACATTGACCATCCAAGGGCAAAACCACTCAAAGACTTCAGAACCCTTCAAACTCATTACAAGAGAAAACATGGAATCAAGCCCTTCATGTGTAGAAAATGCTGCAAATCCTTCGCAGTGAGAGGCGACTGGAGAACCCATGAGAAGAACTGTGGAAAGCTCTGGTATTGCTCTTGTGGCTCTGATTTCAAGCATAAAAGATCTCTTAAAGATCATATCAAAGCATTTGGACATGGCCACACTGCTTGTGGCATTGATTGTCTTGAAGAAGATGAAGCAGCATCTGAAATTGAGCAGGAAAATATTGAAGCCTTCCACTCATAGCCAGTTGTTTGATTAGGACAAGACAATTGAGGTTTCTCATATATTGAGCTAAATATATATATATATATATATATAT 1082 0.4168 MTNPFYSNNFNGCFDLNSPCLFSSSSSCSNPPFSFPSTYRNLACGISVTQCQPSPPSPPLREALPLLNLSPIRHEDPESFFTTMEVDNNEKEAIISSSSMEDENVTVALHLGLPTISSTDLASNIDSTEVADKDEVTVASEYPPNRINRGQYWIPTPAQILIGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLRLPCYCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCCKSFAVRGDWRTHEKNCGKLWYCSCGSDFKHKRSLKDHIKAFGHGHTACGIDCLEEDEAASEIEQENIEAFHS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bach9g00048 329 ProSitePatterns Zinc finger C2H2 type domain signature. 169 189 IPR013087 -
Bach9g00048 329 Gene3D Classic Zinc Finger 210 300 - -
Bach9g00048 329 PANTHER ZINC FINGER PROTEIN WIP2 34 323 IPR043584 GO:0003700|GO:0010468
Bach9g00048 329 Gene3D Classic Zinc Finger 166 189 - -
Bach9g00048 329 SUPERFAMILY beta-beta-alpha zinc fingers 233 271 IPR036236 -
Bach9g00048 329 FunFam Zinc finger protein WIP2 220 302 - -
Bach9g00048 329 ProSiteProfiles Zinc finger C2H2 type domain profile. 167 194 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bach9g00048 Bach-Chr9 370333 372433 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bach9g00048 1 321 C2H2 Transcription Factor Family AT1G51220 61.988 2.44e-135 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bach9g00048 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bach9g00048 - - qsa:O6P43_000130 521.931